Gene Information

Name : GYMC10_4932 (GYMC10_4932)
Accession : YP_003244953.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 5590156 - 5591583 bp
Length : 1428 bp
Strand : -
Note : KEGG: pjd:Pjdr2_4477 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence :
ATGCGCAAAACTAAAATTGTATGTACCATCGGTCCTTCCAGTGAATCGTTGGAAAACACCAAGAAGCTCATTATGGCCGG
CATGAACGTGGCTCGTCTGAACTTCTCCCACGGCGACTTCGAGGAGCATGGCAACCGGATCAAGAACATCCGCCAAGCTT
GCGAAGAGTTGAACAAAACGGTAGCGATCCTGCTTGATACCAAAGGACCGGAGATCCGTACAGGCAAACTTGAAGTGGAA
CCGATTGAGCTTGTACAAGATGAATATATCACCCTTACTACCGAGGAAATCCTTGGTGATAAGAATCGTTTGTCCATTAC
TTATAAAGAGTTGCCTCAAGACGTTCAAGTCGGATCGACGATCCTGATCGACGACGGTCTGATCGGTCTGACCGTGGTGG
AGATTCAAGGCACCGAAATCAGATGCCGCATCGTTAATGGCGGAACCATTAAGAGCAAAAAAGGTGTTAACGTGCCGGGA
GTCGCGATTTCCCTCCCAGGTATTACGGAAAAAGACGCCAACGACATCATTTTCGGGATCGAGCAGGGCATCGATTTTAT
TGCCGCTTCCTTCGTTCGTAAAGCAAGTGACGTGCTGGAAATTCGCGAATTGCTGAAGAAGCACAATGGCGAGCACATCC
AAATCATCTCCAAAATCGAGAACCAGCAGGGCGTTGACAACCTGGATGAAATCCTGGAAGTATCCGACGGCTTGATGGTA
GCCCGTGGCGACCTCGGCGTTGAAATTCCGGCTGAGGAAGTTCCATTGGTTCAAAAACGCATGATCGAAAAATGTAACCT
GGCCGGCAAACCGGTCATTACGGCTACGCAAATGCTGGATTCCATGCAGCGCAACCCGCGTCCTACCCGTGCGGAAGCAA
GTGACGTTGCCAATGCGATTTTCGACGGAACCGATGCCATCATGCTCTCCGGCGAAACGGCTGCAGGTAAATACCCGGTG
GAATCCGTATTGACGATGTCCCGCATCGCGGAAAAAGCGGAATCCGCACTGAACTATCGTGAATTGTTCTTGAAGCAGCG
CATTGCACAAGAAACCAGCGTAACCGAAGCGATCAGCCAATCGGTTGCGATTTCGGCACTCGACCTGAATGCCAAAGCGA
TCATTTCGTCTACCGAATCTGGTCAAACAGCTCGCATGGTATCCAAATACCGTCCACAGGCTCCTATCGTCGCCGTAACG
ACTCAAGAAAGAACGCTGAGACGTTTGGCACTGACTTGGGGCGTAACGCCGGTTAAAGGCGAGCAGGCTTCTTCTACGGA
CGAGATGTTTGATTATGCGCTGCAAGGCGGCGTGAAATCCGGACTCGTGAAAGAAGGCGACCTTGTTGTGATTACGGCTG
GCGTGCCGCTGGGACGTTCCGGTTCCACGAACCTGCTGAAAGTGGACCAAATTCCACAGCAGAAGTAG

Protein sequence :
MRKTKIVCTIGPSSESLENTKKLIMAGMNVARLNFSHGDFEEHGNRIKNIRQACEELNKTVAILLDTKGPEIRTGKLEVE
PIELVQDEYITLTTEEILGDKNRLSITYKELPQDVQVGSTILIDDGLIGLTVVEIQGTEIRCRIVNGGTIKSKKGVNVPG
VAISLPGITEKDANDIIFGIEQGIDFIAASFVRKASDVLEIRELLKKHNGEHIQIISKIENQQGVDNLDEILEVSDGLMV
ARGDLGVEIPAEEVPLVQKRMIEKCNLAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPV
ESVLTMSRIAEKAESALNYRELFLKQRIAQETSVTEAISQSVAISALDLNAKAIISSTESGQTARMVSKYRPQAPIVAVT
TQERTLRRLALTWGVTPVKGEQASSTDEMFDYALQGGVKSGLVKEGDLVVITAGVPLGRSGSTNLLKVDQIPQQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-112 54
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 8e-112 54
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 8e-112 54
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-111 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_4932 YP_003244953.1 pyruvate kinase VFG0479 Protein 3e-112 54