Gene Information

Name : GYMC10_4522 (GYMC10_4522)
Accession : YP_003244552.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 5107053 - 5108216 bp
Length : 1164 bp
Strand : +
Note : KEGG: pjd:Pjdr2_1633 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; CBS domain containing prot

DNA sequence :
ATGATAGTACTGGAGCATGTGAACAAGGTTTATGATAATGGCTTTCACGCGCTGAAGGACATTAATCTCGAATTCAAAAA
AGGGGAAATTACCGTCCTCATCGGTCCTAGCGGCTGCGGCAAATCAACAACCATGAAGCTGATCAACGCGCTCAATACGC
CATCCTCGGGCAAGGTTCTGATTGACGGTCAGGATATCTCCAGATTGAATCCGGTTGAACTGCGGCGCAATATCGGCTAT
GTCATTCAAAGCGTTGGTTTATTTCCGCATATGAATATCTCCAAGAACGCGGGCGTGGTTCCGCGTTTGAAGAAGTGGGA
TAAAGACAAAACAGATCAAAAAGTAAATGAATTGTTGGACATGGTCGGACTGGATCACACCATTTATGGTACACGCTATC
CATCCGAGCTAAGCGGCGGACAACAGCAGCGCGTAGGCGTCGTGCGGGCGCTTGCAGCTGAACCCGATATCATCCTGATG
GACGAGCCGTTCTCCGCACTGGATCCCATCAGCCGGGAGCAGCTTCAGGATGAGCTGATCCGGCTTCAGCAGGAGCTCAA
TAAGACCATTATTTTTGTGACGCATGATATGGATGAAGCTATTAAGATCGCGGATACCATCGTTCTGATGAAAGATGGCG
AAGTGGTTCAAACGGGTAGACCGGACAGCATATTACGGCATCCCGCAAATGATTTTGTGCGTGACTTTATTGGTTCGAAA
CGTCTGCAAAATGAGAATGAAAGCGCCTATGAAATTCCGCTTGTGGATGAAGTGATGATTACGAATCCGGTCACGGCATT
CCCGAGCCGGGGATTGGCTGAAGCCATCAAGATGATGGAAATGAAGCGGGTCGATTCACTGCTGATCGTGGACCGTAACC
GTCAGCTTCAAGGCGCGGTTTCGATCTACCGGGTACTCGACCAATACGGCGAAGAAGGCAAAACCGTCGCGGATGTGATG
CATCCGGTCCGTTTTTCCGTGGCTTCGGGAAGCACGCTTCCGCAGGCCATCGAGATTATGGACAGCCACCAGCTCAGCAA
CCTCCCTGTCGTAGACAGCAATAACCGGTTTCTCGGATTAATCACAAGAGGCAGTGTGGTTAAACATCTGGCCGAAGTCT
ATCCAACGATGGTTCCTCCGGTGCTGAACGGAGAGGGTGAGTGA

Protein sequence :
MIVLEHVNKVYDNGFHALKDINLEFKKGEITVLIGPSGCGKSTTMKLINALNTPSSGKVLIDGQDISRLNPVELRRNIGY
VIQSVGLFPHMNISKNAGVVPRLKKWDKDKTDQKVNELLDMVGLDHTIYGTRYPSELSGGQQQRVGVVRALAAEPDIILM
DEPFSALDPISREQLQDELIRLQQELNKTIIFVTHDMDEAIKIADTIVLMKDGEVVQTGRPDSILRHPANDFVRDFIGSK
RLQNENESAYEIPLVDEVMITNPVTAFPSRGLAEAIKMMEMKRVDSLLIVDRNRQLQGAVSIYRVLDQYGEEGKTVADVM
HPVRFSVASGSTLPQAIEIMDSHQLSNLPVVDSNNRFLGLITRGSVVKHLAEVYPTMVPPVLNGEGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-54 47
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-54 47