Gene Information

Name : GYMC10_4498 (GYMC10_4498)
Accession : YP_003244528.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 5088879 - 5089610 bp
Length : 732 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC3640 bacitracin ABC transporter ATP-binding protein

DNA sequence :
GTGGAAACCATGATTCAAATCCATCAAGTAAGCAAGGTATACAAAGGTACAGAAACCATTACGAACGTCAATATGAACGT
CCGAAGAGGGGAAATTTACGGGTTTTTGGGTCCGAACGGTGCCGGGAAAACCACCATTATGAAAATGATCTTAAACCTGG
TCAAACCGTCTTCCGGTGAAATCCGAGTATTCGATCAACCGGTTCTCCCCACATCCTTTCAATTCTTGAAAAGAATCGGC
AGCATCATTGAGTATCCCGTGTTTTATGACCGGCTTACGGCCGAAGCCAACTTGGATCTTCATTGCAGATACGTCGGATA
TCACAATAAGTCTGCGATTAAGGAAGCGCTGGAGATCGTAGGCCTTCACGGAGTCGGAAAGAAGAAAATCCATGAATTCT
CGCTAGGAATGAAGCAGCGATTAGGGATTGCACGGGCCATTGTGACGAAACCGGACATCCTCATTCTGGATGAACCGATC
AACGGACTGGATCCGATCGGAATTAAGGATATTCGGGAGCTCTTACTGCTATTCAAGAAGAACTACGGAACCACCATTCT
CATATCGAGCCATATCGTGTCGGAAATCGAATCGGTTGCCGATACGATCGGCATTATTCATCAGGGGCAATTATTAACGG
AAGTAAAAATGGAGGACATCCGAGGACAGCATGCCGGGTCGTTGGAGGCGTATTTCATCAATCTCGTTCATGGAGGCAAA
CGCTATGCTTAA

Protein sequence :
METMIQIHQVSKVYKGTETITNVNMNVRRGEIYGFLGPNGAGKTTIMKMILNLVKPSSGEIRVFDQPVLPTSFQFLKRIG
SIIEYPVFYDRLTAEANLDLHCRYVGYHNKSAIKEALEIVGLHGVGKKKIHEFSLGMKQRLGIARAIVTKPDILILDEPI
NGLDPIGIKDIRELLLLFKKNYGTTILISSHIVSEIESVADTIGIIHQGQLLTEVKMEDIRGQHAGSLEAYFINLVHGGK
RYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-39 48
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-29 48
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-32 45
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-32 45
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-32 45
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-32 45
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-37 45
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 5e-28 44
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 5e-28 44