Gene Information

Name : GYMC10_0433 (GYMC10_0433)
Accession : YP_003240544.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 527757 - 529790 bp
Length : 2034 bp
Strand : +
Note : TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_5991 K+-transporting ATPase, B subunit

DNA sequence :
ATGAATAATACGAGAAAAAAAGCGATGTCCCAAGAGATGGTCCGTCAGGCGCTGAAGGAAAGCTTCACGAAGCTGAATCC
CGTCCTGATGATGAGAAATCCGGTCATGTTTGTCGTGGAGGCCGGGACTCTGGTCGTGCTGCTTATGACGATATTTCCGT
CCTATTTCGGTACCGAGGGCAGTATCGGATTTAACCTGACCGTATTCGTCATCCTGCTGTTCACGCTGCTGTTCGCAAAC
TTCGCAGAGGCGCTTGCCGAAGGGCGCGGCAAGGCGCAGGCCGATTCCCTTAAGCAGTCGAAGCAGGAAATGACGGCTCG
CAAAGTGATGGAGAACGGCGGGGTACAATCCGTGTCGTCCACGGCTCTGCGCAAAGGAGATATCGTGATGGTCGCGCAGG
GCGAGATGATTCCCGGGGACGGGGAAGTGATTGCGGGCCTTGCATCCGTTGACGAATCGGCGATTACCGGGGAATCCGCC
CCCGTCATTAAAGAAGCCGGCGGCGATTTCAGCTCGGTCACGGGGGGGACCCGGGTTGTCAGCGATACGATCCGCATCCG
GATTACGAGCGATCCGGGGGAATCGTTTATCGACCGGATGATCTCGCTGGTCGAAGGGGCCTCCCGGCAAAAGACGCCAA
ACGAAATTGCGCTGAATACGCTGTTGATCGTCTTAACGCTGATCTTCCTGATCGTGGTTGTGACGCTGGCACCGATCGCG
AAGTATCTTGGCATCGAGTTGACCGTTCCGGTGCTGATCTCGCTGCTGGTATGTCTGATCCCGACCACGATCGGGGGGTT
GCTGTCAGCGATCGGGATTGCCGGCATGGACCGGGTAACGCAGTTCAACGTGCTGGCGATGTCCGGCAAAGCGGTTGAGG
CCGCCGGGGACATCAACACGATGATTCTGGATAAGACGGGTACCATTACGTTTGGTAACCGGATGGCCAGCCGGTTGATT
CCCGTCGGCGGCGAGTCGCTGGCATCGGTGTCCCAGTGGGCCGCGGTGAGCTCGCTGCAGGATGAGACGCCGGAAGGACG
GTCGGTGTTGGAGCTGCTGAGGAAGGAAGGTTTCGCAGTGGATGAGAGCATGGCGGATGGGGCGGAATTCATCGAATTTA
AGGCGGAGACCCGGATGAGCGGCATGGACCTGAGGGATGGCCGGAAAGTCCGCAAGGGCGCTGTGGATGCCGTCAAGGCG
TGGGTGCAGTCGCAAGGAGGCCCTATCCCTTCGGATTTGTCGCCAAATAGCGACGCCATCGCCACAGAGGGGGGAACCCC
GCTTGCCGTCGCCGTGGATAACCGCATCTTTGGTTTGATCTACCTGAAGGATACCGTGAAGCCGGGCATGAAGGAACGGT
TTGACCAGCTGCGCCGGATGGGCATCAAGACGATTATGTGCACGGGCGACAACCCGCTCACCGCGGCGACGATTGCCCGT
GAAGCGGGCGTCGATGATTTCATCGCGGAGAGCAAGCCCGAGGATAAGATTGCCGTCATCCGCCGAGAACAAGCCGAAGG
CAAGCTGGTGGCGATGACCGGGGACGGGACGAACGATGCCCCGGCGCTGGCCCAGGCCGATGTGGGGCTGGCGATGAACA
GCGGTACCACCGCAGCCAAGGAAGCGGCCAATATGGTGGATCTGGATTCGGATCCGTCGAAGATTATCGAGGTGGTTGCC
ATCGGCAAGCAGCTGCTGATGACGCGCGGCGCGCTGACCACCTTCAGCGTCGCGAACGATGTCGCCAAATATTTTGCCAT
CATTCCGGCGATGTTTGCAGCTGCTATTCCAAGCATGAACGTTCTGAACGTCATGGGACTGGGTTCTCCCATGTCGGCGA
TTCTGTCGGCGCTGATCTTTAATGCCATTATCATTCCGCTGCTGATTCCGCTTGCGATGAAGGGTGTGGCCTATAAGCCG
ATGAGCTCGTCGAAGCTGCTGCAGCGCAATGTGCTGGTCTACGGATTAGGCGGCGTGATCGTGCCGTTCATCGGGATTAA
GCTGATCGATATGATCGTGCATCTCTGGATTTAG

Protein sequence :
MNNTRKKAMSQEMVRQALKESFTKLNPVLMMRNPVMFVVEAGTLVVLLMTIFPSYFGTEGSIGFNLTVFVILLFTLLFAN
FAEALAEGRGKAQADSLKQSKQEMTARKVMENGGVQSVSSTALRKGDIVMVAQGEMIPGDGEVIAGLASVDESAITGESA
PVIKEAGGDFSSVTGGTRVVSDTIRIRITSDPGESFIDRMISLVEGASRQKTPNEIALNTLLIVLTLIFLIVVVTLAPIA
KYLGIELTVPVLISLLVCLIPTTIGGLLSAIGIAGMDRVTQFNVLAMSGKAVEAAGDINTMILDKTGTITFGNRMASRLI
PVGGESLASVSQWAAVSSLQDETPEGRSVLELLRKEGFAVDESMADGAEFIEFKAETRMSGMDLRDGRKVRKGAVDAVKA
WVQSQGGPIPSDLSPNSDAIATEGGTPLAVAVDNRIFGLIYLKDTVKPGMKERFDQLRRMGIKTIMCTGDNPLTAATIAR
EAGVDDFIAESKPEDKIAVIRREQAEGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAAKEAANMVDLDSDPSKIIEVVA
IGKQLLMTRGALTTFSVANDVAKYFAIIPAMFAAAIPSMNVLNVMGLGSPMSAILSALIFNAIIIPLLIPLAMKGVAYKP
MSSSKLLQRNVLVYGLGGVIVPFIGIKLIDMIVHLWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-157 61
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-157 61
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-157 61
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 6e-158 61
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-157 61
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-157 61
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-129 57
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 4e-129 57