Gene Information

Name : GYMC10_4299 (GYMC10_4299)
Accession : YP_003244332.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : succinic semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4890124 - 4891548 bp
Length : 1425 bp
Strand : -
Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: oih:OB2863 succinate-semialdehyde dehydrogenase

DNA sequence :
ATGTTTCAAAATCAAATCTATATCGCCGGAAAATGGATTCAGACCGAGGAGCAGATGGATGTATATAACCCGGCGGACGG
CACGGTTATCGGTACCGTATCCAAAGGCGGGAAGAAGGAAGCCCGGCTTGCCGTCGATGCGGCCGCAGATGCTTTTCCGG
CATGGTCCCGCAGAACGGCGAACGAGCGGGGAGAGCTGCTGCGCCGCTGGCATGAGCTGATCGCGGAACATACGGACGAA
TTGGCAAGGATTATGACTACGGAGCAGGGGAAACCGCTGAAGGAAGCGGCGGGCGAGATTCAATATGCCAACAGTTTCGT
GGCATGGTACGCGGAAGAAGGCAAGCGAATCTACGGCGAGACCATCCCCGGATCATCCAGCCGCCAGCGCATCATTGTCA
CGAAGCAGCCTGTTGGCGTCGTTGCCGCCATCACGCCATGGAATTTCCCGGCCTCCATGATTACACGTAAGGTAGCGCCG
GCCTTGGCGGCGGGGTGCACCGTGGTGATCAAACCATCCGGCGAGACGCCGTTCACGGCGATCAAGCTGGTGGAGCTAGC
GGATCAAGCCGGTATTCCAGCCGGGGTCATTAACATCGTAACCGGGTCTTCAAGCGACATTTCCGGCGTGTGGCAAGAGG
ACAGCCGGGTTAGAAAGCTGTCTTTTACGGGATCCACCGAAGTAGGAAAACAGCTGATGGCCGGCGCGTCGGCCAACGTC
AAAAAAATATCGCTGGAGCTTGGCGGGCATGCACCCTTTATCGTGACTGATCAGGCTGACCTGGATCAAGCGGCTGCGGG
ATTGATTTCTTCCAAGTTCCGCAATGGGGGACAGACCTGCGTATGCGCCAACCGGGTTTATGTTCAAGAAGGGATCGCGG
AGAAATTCGCTGCGAAGTTTTCGGAGCTTGTCAAACAATTGAAGGTGGGCAGCGGTCTGGAGAATGGGGTCGATATCGGT
CCCTTGATTAATCGGGAAGCCGTGGATAAAGTCGTACGACAGATCAAGGATGCGAAAGAGAAAGGCGGCATCGTCATGGC
AGGCGGTCAAGCCCTGCCCGAGCTCGGCCGCAATTATGTGGAGCCCACGGTCATCATGAACGCTACGGACGACATGGAGT
GCATGAACGAGGAGACCTTCGGCCCCCTTGCGCCGATTACCACTTTCGAAACGATAGACGAAGCCGTGCAGCGTGCCAAT
AACAGTCCGTATGGCTTGGCCGCCTATGTATTTACGCAAAATCTGGGTGAAGCGGTACGCATTGCCGAATCGTTGGATTA
CGGAATTGTAGGCGTGAATGATCCGGTGCCTTCGACAGCGCAAGCGCCGTTCGGCGGCTTTAAGGAGAGCGGGCTCGGCC
GGGAAGGCGGACATTACGGAATGGAGGAGTTCCTGGAGGTAAAATACATTTCGCTTGGATTATAA

Protein sequence :
MFQNQIYIAGKWIQTEEQMDVYNPADGTVIGTVSKGGKKEARLAVDAAADAFPAWSRRTANERGELLRRWHELIAEHTDE
LARIMTTEQGKPLKEAAGEIQYANSFVAWYAEEGKRIYGETIPGSSSRQRIIVTKQPVGVVAAITPWNFPASMITRKVAP
ALAAGCTVVIKPSGETPFTAIKLVELADQAGIPAGVINIVTGSSSDISGVWQEDSRVRKLSFTGSTEVGKQLMAGASANV
KKISLELGGHAPFIVTDQADLDQAAAGLISSKFRNGGQTCVCANRVYVQEGIAEKFAAKFSELVKQLKVGSGLENGVDIG
PLINREAVDKVVRQIKDAKEKGGIVMAGGQALPELGRNYVEPTVIMNATDDMECMNEETFGPLAPITTFETIDEAVQRAN
NSPYGLAAYVFTQNLGEAVRIAESLDYGIVGVNDPVPSTAQAPFGGFKESGLGREGGHYGMEEFLEVKYISLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 7e-114 52
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 2e-80 41