Gene Information

Name : GYMC10_3916 (GYMC10_3916)
Accession : YP_003243953.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4490088 - 4491005 bp
Length : 918 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: btl:BALH_1667 ABC transporter, ATP-binding protein

DNA sequence :
ATGAGTGCACTCGCTATTGTGCAAACGCAAAATCTGTCTAAAACGTATGGGGCAAATAACAGTGTAAATAAAGTGGATTT
ACGTGTTCAAGAGGGAGAAATCTATGGGTTTCTGGGCCCAAACGGTGCAGGGAAAACAACGACGCTAAAAATGCTGCTCG
GTCTCATCAAACCTACGGAAGGGACCATCCATATTTTCGGGGAAAACCTGAGCAAACATCGGCCATCCATTCTGCAACGT
ACCGGGTCGCTGATTGAATCTCCCTCTTATTACGGGCATTTGACCGGGCTTGAGAATATGAAGGTTATGCAGAGCCTTCG
GAACGTACCCGATAAAAACGTGCACGAGGCCCTTCGTATTGTGCGGCTGGAAAATCAGAAAAACAAAAAAACGGAACAAT
ATTCGCTAGGAATGAAGCAACGGCTGGGCATCGCGATGGCACTGCTTGCTTTCCCCAAGCTGCTGATCCTTGATGAGCCG
ACGAACGGACTTGACCCTGCAGGCATTGGAGAAATTCGGGAGCTCATCAAGTCATTGCCTGAACGCTATGGAATCACTGT
ATTGCTCTCCAGCCATCTCCTCTCGGAGATCGAACAAATCGCTACCTCCGTTGGTATTATCACGCAAGGGAATCTGTTGT
ATCAGGGGAGTATGGCAAGCTTGAGGCAAAAAAACAGAAACGCCATTTTTATGAAAACCGGGGACAATGCGAAAGCCGAG
CAGCTCCTGCTCACTCAAGGATACAGCCCGGCACAAAGTGGCAGCCGGCTTGAGCTCGGCACGCTTCAGGATACGGAAGT
GGCGGAGATGAACAGACTGCTTGTTGAACATAAAATCGAAGTCACTCGGATTGAAGAGCAGAAGAAAAGTTTGGAGGATA
TATTCCTGGAGCTGACAGGAAAGGGGCGTAGCTTGTGA

Protein sequence :
MSALAIVQTQNLSKTYGANNSVNKVDLRVQEGEIYGFLGPNGAGKTTTLKMLLGLIKPTEGTIHIFGENLSKHRPSILQR
TGSLIESPSYYGHLTGLENMKVMQSLRNVPDKNVHEALRIVRLENQKNKKTEQYSLGMKQRLGIAMALLAFPKLLILDEP
TNGLDPAGIGEIRELIKSLPERYGITVLLSSHLLSEIEQIATSVGIITQGNLLYQGSMASLRQKNRNAIFMKTGDNAKAE
QLLLTQGYSPAQSGSRLELGTLQDTEVAEMNRLLVEHKIEVTRIEEQKKSLEDIFLELTGKGRSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-82 65
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-50 46
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-32 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 7e-25 42
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 7e-25 42
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 7e-25 42
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 7e-25 42