Gene Information

Name : GYMC10_3687 (GYMC10_3687)
Accession : YP_003243729.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4253801 - 4254568 bp
Length : 768 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rxy:Rxyl_3007 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGCAAATAAATCTATCGGGTAACGTCGCTTTAGTCACAGGATCTAGCGGAGGAATCGGTCGGGCGGTTGCCATCATGCT
GGCGAGAAGCGGAGCCAAGGTAGCGCTGAATTATCTGAACAGCAAGGAGGCTGCCGAAGAGGCCGTTGCCGAGATCCGGG
ATTTTGGCGGCGAAGCCCATGCTTTTCGCGCAGACGTTGCGCAAGCAGAACAGGCGGAGGCGCTTGTGGCGGAAGTGGAA
AAGGCGTTTGGCGGACCGGTAACGATTCTGGTTAACAATGCGGGGCATTTGGTCCAACGGCTGGCAAATGCGGAAATGAC
CGAGGAGCTCTACGCCAAGATCATGGACGTCAATATGAAAAGCACGGTATTCGTGAGCAAAGCGGTCATTTCGGGGATGA
AAGCGGCCGGTCAAGGCCGCATCGTGAACATGACCTCCGTTGCGGCGCACAACGGCGGCGGACCGGGTGCTAGCATTTAT
GCAGCAAGCAAGGCTGCCGTCCTGAGCTTTACCAAAGGCTTGGCGAAGGAGCTTGCTTCAAGCGGAATCAATGTGAATGC
CGTATCCCCCGGCTTTATCGGGCAAACGGCGTTTCACGCGACCTTTACCCCGGATGATGCGCGCAAAGCTACCATTCAGG
GCATTCCGCTTGGACGAGAAGGCACGCCGGACGATGTCGCCGGCTCCGTGTTGTTTCTCGTCTCGGGGCTGTCTTCTTAT
ATAACAGGTGAGACGATCGAAATCAACGGCGGCATGTTCATGCGATGA

Protein sequence : 
MQINLSGNVALVTGSSGGIGRAVAIMLARSGAKVALNYLNSKEAAEEAVAEIRDFGGEAHAFRADVAQAEQAEALVAEVE
KAFGGPVTILVNNAGHLVQRLANAEMTEELYAKIMDVNMKSTVFVSKAVISGMKAAGQGRIVNMTSVAAHNGGGPGASIY
AASKAAVLSFTKGLAKELASSGINVNAVSPGFIGQTAFHATFTPDDARKATIQGIPLGREGTPDDVAGSVLFLVSGLSSY
ITGETIEINGGMFMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-29 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 5e-29 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 4e-29 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-29 41