Gene Information

Name : GYMC10_3454 (GYMC10_3454)
Accession : YP_003243498.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3990994 - 3991668 bp
Length : 675 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cdf:CD0486 two-component response regulator

DNA sequence : 
ATGCATAAGATACTAATCGTGGACGATGAGGCGGATCTTCGAAAGCTGCTGACCGATTACTTTGAAATCAATGGATATTT
TGTCATGACGGCCAAGGACAGCCGGGAAGCCATGCGAAAAGTGGAACTAGGACCCGATCTCGTTTTGCTCGATATCAACA
TGCCTGAGGAGAGCGGCCTTGAAATTTGCGAAAGAATAAGAGGCTTTGTTTCGTGCCCCATCTTATTTTTGACCGCTCGA
ATCGAAGATGCCGATAAAATAGCCGGCTTTCGGGCAGGAGGCGATGACTATATCCTGAAACCTTTCAGTATTCGCGAGCT
TGGCGCCAGAGTAGAAGCGCATTTGCGCAGGGAACAGCGAGTCCCAACCAAAGCCTCGGTGAGGTTTAACCACGATTTGG
TCATTAATTATACGGCCCGGGAGCTCTATTTCCAGGATAAACGAATACCTCTGGCCAAAAAAGAGTTCGGCATTATCGAA
TTGCTGTCCATGAATCCCGGCATGGTATTCGAGAAGGAGCGCATTTACGAGAAAATTTGGGGCCTGGACGAAGAAGGCGA
TAGCAGCGTCATCGCCGAGCATATTCGGCGAATTCGCAACAAATTCAAGGAATACGGCTGCAGCGATCGAATCGAGACGG
TGTGGGGAGTAGGATACAAATGGCTAAACTCGTAA

Protein sequence : 
MHKILIVDDEADLRKLLTDYFEINGYFVMTAKDSREAMRKVELGPDLVLLDINMPEESGLEICERIRGFVSCPILFLTAR
IEDADKIAGFRAGGDDYILKPFSIRELGARVEAHLRREQRVPTKASVRFNHDLVINYTARELYFQDKRIPLAKKEFGIIE
LLSMNPGMVFEKERIYEKIWGLDEEGDSSVIAEHIRRIRNKFKEYGCSDRIETVWGVGYKWLNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 5e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_3454 YP_003243498.1 winged helix family two component transcriptional regulator NC_014475.1.orf0.gen Protein 2e-31 41
GYMC10_3454 YP_003243498.1 winged helix family two component transcriptional regulator NC_005054.2598277.p0 Protein 2e-31 41