Gene Information

Name : GYMC10_3384 (GYMC10_3384)
Accession : YP_003243431.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3908632 - 3909315 bp
Length : 684 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_2049 ABC transporter related

DNA sequence : 
ATGGAAATTTTAAACATCGAGCATCTGTCTAAAATATACGGTACAGGCGAATCGGCGGTAAAGGCGCTTGACGATGTGTC
ATTTTCGGTTCAAAAAGGCGAATTTGTGGCCATTATCGGACCGTCCGGATCGGGAAAGTCGACCCTTCTTCATCTGCTGG
GAGGCGTCGATCGACCGACAAGCGGCAAGGTTTTCGTTGAAAATACGGACATCTATGCATTGGACGAAACGCGACTGGCC
ATCTTCCGGCGGCGACAAATCGGACTGATCTACCAGTTTTTCAATCTGATTCCCACCTTAACGGTAAAAGAGAACATGAC
GCTTCCGCTCTTGCTTGACAACCAACAGGAAGATAAGAAGCAATTCGATGGGCTCGTAAAGACGCTAAATTTAGAGCATC
GTTTAAACCACCTGCCCAATCAGTTATCCGGCGGACAGCAGCAGCGGGTTTCGATCGGCAGAGCGATCATCAGTAACCCT
GCCATCATGCTGGCAGACGAGCCCACCGGGAATTTGGACAGCAAAAATAGCAGCGAGATCGTCGATTTGTTGAAAATGTT
GAATAAAACCTATCATCAGACGCTGATTGTCATCACTCACGATGAACGAATCGCTTTGCAGGCCGACAGGATCATTTCAA
TTGTAGACGGAAAGATTGCCAAAGACGAGGTGATCCGTCTATGA

Protein sequence : 
MEILNIEHLSKIYGTGESAVKALDDVSFSVQKGEFVAIIGPSGSGKSTLLHLLGGVDRPTSGKVFVENTDIYALDETRLA
IFRRRQIGLIYQFFNLIPTLTVKENMTLPLLLDNQQEDKKQFDGLVKTLNLEHRLNHLPNQLSGGQQQRVSIGRAIISNP
AIMLADEPTGNLDSKNSSEIVDLLKMLNKTYHQTLIVITHDERIALQADRIISIVDGKIAKDEVIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_3384 YP_003243431.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-63 59
GYMC10_3384 YP_003243431.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-57 55
GYMC10_3384 YP_003243431.1 ABC transporter-like protein NC_008702.1.4606598. Protein 9e-37 45
GYMC10_3384 YP_003243431.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-38 42