Gene Information

Name : GYMC10_3230 (GYMC10_3230)
Accession : YP_003243289.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3722401 - 3723114 bp
Length : 714 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cur:cur_1729 putative ABC transport system, ATP-binding protein

DNA sequence :
TTGCTTGAAATTAATAACTTAGTCAAACATCGCGGATCTCAAGAAATCTTATCGGGTATCAGTTTTAAAGCTAGACCCGG
TAGAGTAACTGGTTTTTTAGGTCCAAACGGGGCAGGTAAAAGCTCAACGCTTCGCATCCTGCTTGGATTAGATCGCGCCA
CATCAGGGAGTGCACTCATAAATGGCAAGCCATTCTCAGAGTTAGATAATCCTCTAGCAACAGTAGGTGCCGCATTGGAT
GGATCTGGAGCTCACCGCAGCCGAACAGGACGGGCCCATTTACGCTGGATTGCTCGTGCCGCAGGATTGTCTAACTCACG
TGTCGAGGAAGTTTTGGAAATCGTAGGTCTTACTAATGCAGCTGATAAAAGAGTGGGAAAATATTCGCTTGGTATGGGGA
GAAGACTTGGAATGGCCGCTGCACTGCTGGGTGATCCCCCAATATTGGTTCTAGATGAACCCGTAAATGGGCTCGACCCG
GAAGGAATTCGTTGGATCCGGACATTTTTGCGTAAACGGGCTGAGTCTGGCAACACGGTGTTACTATCCAGTCATCTAAT
AGGAGAGCTTGCAGAGACAGTTGATGATGTGGTTATTATTAAGCAAGGAACAATCGTTGCAGATGGAACGTTGGATGAAG
TAATAGGTAACCATTCCACGCTGGAGAAAGCTTTTTTTGCCCGGACATCTGATCATGCAGGTGGTGTTGTATGA

Protein sequence :
MLEINNLVKHRGSQEILSGISFKARPGRVTGFLGPNGAGKSSTLRILLGLDRATSGSALINGKPFSELDNPLATVGAALD
GSGAHRSRTGRAHLRWIARAAGLSNSRVEEVLEIVGLTNAADKRVGKYSLGMGRRLGMAAALLGDPPILVLDEPVNGLDP
EGIRWIRTFLRKRAESGNTVLLSSHLIGELAETVDDVVIIKQGTIVADGTLDEVIGNHSTLEKAFFARTSDHAGGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-58 56
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 8e-55 52
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 8e-55 52
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 9e-51 47
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-33 42
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-33 42