Gene Information

Name : GYMC10_2150 (GYMC10_2150)
Accession : YP_003242238.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 3.5.4.26
Position : 2494072 - 2495181 bp
Length : 1110 bp
Strand : +
Note : KEGG: pjd:Pjdr2_2349 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGTTTAGCATGGATATCGTCAACGATGAATTCTATATGTCACTTGCGCTGGATCTGGCTGAACGTGCGCAGGGCCAAAC
CGGGATCAACCCGGTAGTCGGCTGCGTCGTCGTTAAGGACGGTGCTCTCGCCGGGGTGGGCACGCATCTGGAACGCGGAA
CGCCGCATGCCGAGGTTCATGCCCTGAATATGGCCGGGCCGAAAGCGGCAGGCAGTACCGTGTACGTGACATTGGAGCCC
TGCAGTCACTACGGCGCAACGCCGCCTTGCAGCGAGAGGCTTATCGCCGAGGGCGTTCGGCGGGTGGTTGTGGCCTGCGA
GGATCCGAATCCCCTCGTGGCGGGCAGAGGGATTCAGATGCTGCGCGCAGCGGGAATCGAGGTTGAAACGGGTATCCTTA
AAGATCGCGCTCTTCGCCTGAACGAAGCCTTTGTTAAATTCATTACGACGGGCCGGCCCTTCGTCACGTTAAAGACGGCG
AGCACGCTGGACGGCAAGATCGCTTCGAAAACCGGGGACAGCAAGTGGATCTCCAATGAAAAATCCCGGGAGCTTGTGCA
TACGCTGCGCCATCGCCATCAAGGCATCATGGTCGGCGTGTCTACGGTTATCGCGGATAACCCGAGCCTGACGACCCGGC
TTGGCGTTGAGGGGCTTCACCCGGTCAGGATCATCGTGGATTCGAGCCTGAGGATACCGCTCGACAGCCATGTCGTGTCA
GACGGATTGGCGCCAACCTGGATCTTGGCGACGGAGCAGGCGGATGATACGAAGCGGTCCGAGTTGGAAGAGCTTGGTGC
TCAGGTCTTCCCCTGCGGACCTGGACCACGGGTGGATCTAAAGGTAGCGCTGCTCCAACTGGGACAAAAGGGGATCGCCT
CGATTTTGCTGGAAGGCGGCGGTACGCTTAATGGCTCGATGCTGGAGCAGAAGCTGGTGGACCGGCTCATCCAGTTTATC
GCCCCCAAAATCATCGGCGGGTATGATGCGCCGGGAAATTACATGTTCAGCGGTTATGAACAGATGAACCAAGCGATTTC
GCTGACAGGACTTGAGACCGAAAGACTGGGCGACAATATCTACGTCACCGGCATTCCGGTCTGGAAATAA

Protein sequence :
MFSMDIVNDEFYMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTHLERGTPHAEVHALNMAGPKAAGSTVYVTLEP
CSHYGATPPCSERLIAEGVRRVVVACEDPNPLVAGRGIQMLRAAGIEVETGILKDRALRLNEAFVKFITTGRPFVTLKTA
STLDGKIASKTGDSKWISNEKSRELVHTLRHRHQGIMVGVSTVIADNPSLTTRLGVEGLHPVRIIVDSSLRIPLDSHVVS
DGLAPTWILATEQADDTKRSELEELGAQVFPCGPGPRVDLKVALLQLGQKGIASILLEGGGTLNGSMLEQKLVDRLIQFI
APKIIGGYDAPGNYMFSGYEQMNQAISLTGLETERLGDNIYVTGIPVWK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-55 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-55 41