Name : GYMC10_2036 (GYMC10_2036) Accession : YP_003242124.1 Strain : Paenibacillus sp. Y412MC10 Genome accession: NC_013406 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2379458 - 2380771 bp Length : 1314 bp Strand : + Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bbe:BBR47_57510 hypothetical protein DNA sequence : ATGGAATTATATGAAAACATGCTGGACCGCGTGAATAAATTGGCGGTCGTCGGACTGGGTTATGTCGGCCTGCCGCTGGC GGTCGCGTTCTCGAAAAGGCTGGATGTCATCGGCTTTGATCTGAGCGAGGCGAAGGTGTCTCAGTATCGCAGCGGATTCG ATGCTACCGGTGAGATCGGAGATGACTTGCTTGCGGGCTGTGCGGCCGATTTCACCTCGGATCCGGACAAGCTGAAGGAG GCTCGCTGCTTTATCGTGGCCGTTCCGACACCCGTAAAAAGCGGCAATGTGCCGGACCTGAAATTCGTGCGGAATGCCAG CCGTTTGGTCGGTCGCGCCTTGACGCGGGGAGCGGTGGTTGTCTATGAGTCAACGGTCTATCCGGGCGTTACGGAGGAAG TCTGCATTCCGATTCTCGAAGAGGAGTCGGGCCTGCGGCTGGGCGAGGATTTCAAGGTGGGGTATTCTCCGGAACGGATT AACCCCGGAGACCAGGTCCACCGGCTGGAGACCATCGTGAAAATCGTGTCCGGCAATGATCCGGAGGCGCTGGAGACGGT TGCCAGACTGTATGAGCTGATTATCGAGGCAGGCGTTCACCGGGCGGAATCCATCCGGGTGGCGGAAGCGGCAAAGGTCA TCGAGAATGCGCAGCGCGACATCAACATTGCCTTTATGAACGAGCTTTCGATGCTGTTCAACCAGATGGACATCGATACG AATGCCGTGCTGCGCGCAGCGGAAACGAAATGGAATTTCCTCCCGTTCCGCCCTGGTCTCGTCGGCGGGCATTGCATCGG AATCGACCCGTATTATCTGACGTATAAGGCCGAGGATACGGGGTATCATTCCAAGATTATTTTGGCAGGTCGGCATATCA ATGACGGAATGGGAAAATACGTCGCCCAGCACGTCATTAAACTTGCGATTCGCCAAGGGATCGATCTGATGAAGGCGAAG GTGGCCGTCATGGGCCTTTCGTTCAAGGAGGACTGCCGGGATATCCGCAATTCCAAGGTCATCGATATTATTCGGGAGCT GCAGGATTACGGAATCCGGCCGATGGTGGCGGACCCGCACGTAGACCCGAAGCAGGCTTACGAGGAATACGGCATCGAGC TGTCGGACATGAGCGAGCTGAGCGGAATCCAGATTGCGGTTGTGGCGGTCGCTCACCGGGAGTTCAAGCAGCTCGGGATC GCGGCATTCAAGGAGATGTTCAGTTCGGAACAGGCGAAGCTTCTGATCGACGTGAAGGGAGCTTATCCAAAAACCGAATG CGAAGCCCATGGCTTTCATTATTGGAGTTTGTAA Protein sequence : MELYENMLDRVNKLAVVGLGYVGLPLAVAFSKRLDVIGFDLSEAKVSQYRSGFDATGEIGDDLLAGCAADFTSDPDKLKE ARCFIVAVPTPVKSGNVPDLKFVRNASRLVGRALTRGAVVVYESTVYPGVTEEVCIPILEEESGLRLGEDFKVGYSPERI NPGDQVHRLETIVKIVSGNDPEALETVARLYELIIEAGVHRAESIRVAEAAKVIENAQRDINIAFMNELSMLFNQMDIDT NAVLRAAETKWNFLPFRPGLVGGHCIGIDPYYLTYKAEDTGYHSKIILAGRHINDGMGKYVAQHVIKLAIRQGIDLMKAK VAVMGLSFKEDCRDIRNSKVIDIIRELQDYGIRPMVADPHVDPKQAYEEYGIELSDMSELSGIQIAVVAVAHREFKQLGI AAFKEMFSSEQAKLLIDVKGAYPKTECEAHGFHYWSL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-104 | 54 |
tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-96 | 50 |
tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-96 | 50 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
GYMC10_2036 | YP_003242124.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 2e-96 | 50 |