Gene Information

Name : GYMC10_1828 (GYMC10_1828)
Accession : YP_003241918.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 2152489 - 2153211 bp
Length : 723 bp
Strand : +
Note : PFAM: alanine racemase domain protein; KEGG: pjd:Pjdr2_3878 alanine racemase domain protein

DNA sequence : 
TTGGATCGGGATGAGAAAGAGGTGAGTCGTCCCTTGAGTTTGAAGGAACGTATCGATCAAGTGGAACAGCGAATAACGGA
GGCTTGCGCAAGAAGCGGCAGGGACCGGAATGATGTGAATATGATTGCGGTCACGAAATATGTCTCCTTGGATATGACGG
CTTCGGTACTGGATCACGGACTTTTGCATATCGGCGAGAACCGCTGGCAGGATGCCCAGGCGAAGTGGAATGCACTCGGC
AACCGCGGCACATGGCATTTCATCGGCCATCTTCAGACCAATAAGGTCCGGGATGTCATTGATAAATTTCAATATATTCA
TTCGCTCGACCGCTTGTCTTTGGCCCATGAGCTGGAGAAGCGGGCGGCTGCGCTGAATCTGCAGGTATCCGCCTTGATGC
AGGTCAATATCTCCGGTGAGGAATCCAAGTACGGCTTGCCTCCCGAGCAAGCAGCCGAGTTTTTGAAGGAAATCAACAGT
CTTTCGCACGTAAAGGTAACCGGACTCATGACCATGGCTCCATACGAATCGTCGGCGGAGCAGACGCGTCCTGTATTTCG
TGGTTTAAGACAACTAAGAGATGAGCTGAACGAGCAGGCGCTTACGGCGGAGCCATTGACCGAATTGTCCATGGGCATGT
CCAATGACTTTGAAGTTGCCATAGAGGAAGGGGCGACCTGGGTGCGTCTCGGCTCAATTTTAGTAGGGAAAGAGGAGGAT
TGA

Protein sequence : 
MDRDEKEVSRPLSLKERIDQVEQRITEACARSGRDRNDVNMIAVTKYVSLDMTASVLDHGLLHIGENRWQDAQAKWNALG
NRGTWHFIGHLQTNKVRDVIDKFQYIHSLDRLSLAHELEKRAAALNLQVSALMQVNISGEESKYGLPPEQAAEFLKEINS
LSHVKVTGLMTMAPYESSAEQTRPVFRGLRQLRDELNEQALTAEPLTELSMGMSNDFEVAIEEGATWVRLGSILVGKEED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-27 43
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-27 43
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 2e-27 43
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-27 43