Gene Information

Name : GYMC10_1519 (GYMC10_1519)
Accession : YP_003241611.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1795788 - 1796744 bp
Length : 957 bp
Strand : +
Note : KEGG: pjd:Pjdr2_4437 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence : 
ATGCGCACAATCGTAGTTGGCAGTAGACAAAGTGCTCTGGCACTGACACAGACAGGACAGGTTATCGATGATTTGAAGCG
TTTGGCCAAGGAGCACGGATTGGAGTATGACTTCGCGGTCAAGAAAATCGTCACCAAGGGCGACCGCATACTGGATGTTA
CCCTTTCCAAGGTAGGCGGCAAAGGATTGTTTGTCAAAGAAATCGAGCAGGCCATGATAGACGGCGAAATTGACATGGCG
GTTCACAGCATGAAGGACATGCCTTCCGTTCTGCCTGAAGGACTGGTTTCCGGGGCGGTGCCCGCAAGAAAGGATCCTCG
CGACTGCCTGATCTCCAAAGAAGGGACAACGCTGGATGACCTTCCTCAAGGTGCCAAGGTAGGAACAAGCAGTCTGCGCC
GGTCCAGCCAGCTCAAGGCCTATCGGCCTGATCTGCAGATCGATTGGATCAGGGGAAACATCGATTCACGGATTCGCAAA
ATGGAGGAAGGCGAGTTTCAGGCCATCATTCTGGCGACAGCCGGCCTTCAGCGTATGGGCTGGGAGGATCGGATCACGTC
GTACCTGCCGGTTGAAGTCAGTCTGCCTGCCGTAGGCCAAGGCGCTCTCGGCATTGAGTGCCGTGAAAACGATGAAGAGC
TGCTGCATCTGCTCTCTCTTTATAACGATGAAGTAACCGCGCGGACCGTTGCGGCGGAACGCAAGTTTCTAAGCGAGCTG
AACGGCGGATGCCAGGTCCCGATCGGGGCTTACGCCGTCATGAAGAATGTGGAGGCAGGAGATTCCCGCGGCGAACAAAA
CGTTATACAATTAACAGGAATGGTAGGTTCTCCTGACGGCGAAATCGTCTTGAAGGAAAGCGCCGAAGGAACCGACCCTG
AAGCGCTCGGAGTGGAAGTGGCTGCAAAGCTGAAAGCTAAAGGAGCGGAGAAGATACTGGCACAAGTTAGGGGTTGA

Protein sequence : 
MRTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLEYDFAVKKIVTKGDRILDVTLSKVGGKGLFVKEIEQAMIDGEIDMA
VHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDDLPQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRK
MEEGEFQAIILATAGLQRMGWEDRITSYLPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSEL
NGGCQVPIGAYAVMKNVEAGDSRGEQNVIQLTGMVGSPDGEIVLKESAEGTDPEALGVEVAAKLKAKGAEKILAQVRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-59 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-59 47