Gene Information

Name : GYMC10_1492 (GYMC10_1492)
Accession : YP_003241584.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1763243 - 1764001 bp
Length : 759 bp
Strand : +
Note : KEGG: pjd:Pjdr2_4458 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGAGATCTAACGGACGTAAGAGCGATGAGCTCCGACCGATGAATTTATCGACCCATGTGAATAAATATGCGGAAGGCTC
CGTGTACATCGAGATGGGGGACACCAAGGTGCTGATTACGGCAACCGTGGACGAGAAAGTTCCCCCGTTTCTGAAAGGAC
AAGGAAAGGGCTGGGTGACGGCTGAATATTCAATGCTGCCGCGCGCAACACAATCCCGCAACCAACGGGAAGCCAATCGC
GGTAAACTCAGTGGCCGGACGATGGAAATTCAACGGCTGATCGGCAGAGCGCTCAGGTCTGTTGTGAATCTGCATGCTCT
TGGCGAGCGGACGATTACGCTGGACTGCGATGTAATCCAGGCGGATGGCGGAACGCGGACCACCTCCATTACAGGAGCAT
TTGTAGCTTTAGCCATAGCTGTAAATAAAATTGCAGAACAACATAAATTAGCGGTATTCCCGATCACGGACTACCTGGCA
TCCATTAGCGTGGGCATTGCCGGCGGACAGGCGCTGCTGGATCTGAACTATGAAGAGGATTCCAAGGCGAAGGTGGACAT
GAACTTGGTCATGACCGGAAGCGGCAAATTCGTTGAGGTTCAGGGAACCGGCGAAGAGAGCCCGTTTTCCCGCGAGGAGC
TGGATCAAATCCTGGAGCTGGGAGAACAGGGGATCCGCGAGCTTATCGAGCGTCAGCAGGAGGCGCTTGGCCCGATTGCG
GCCAAGATCGGTTCCGTGAATGCGAGCACCGGAGTCTGA

Protein sequence :
MRSNGRKSDELRPMNLSTHVNKYAEGSVYIEMGDTKVLITATVDEKVPPFLKGQGKGWVTAEYSMLPRATQSRNQREANR
GKLSGRTMEIQRLIGRALRSVVNLHALGERTITLDCDVIQADGGTRTTSITGAFVALAIAVNKIAEQHKLAVFPITDYLA
SISVGIAGGQALLDLNYEEDSKAKVDMNLVMTGSGKFVEVQGTGEESPFSREELDQILELGEQGIRELIERQQEALGPIA
AKIGSVNASTGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-57 54