Gene Information

Name : GYMC10_1214 (GYMC10_1214)
Accession : YP_003241310.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1432996 - 1433658 bp
Length : 663 bp
Strand : -
Note : KEGG: btl:BALH_2245 chloramphenicol acetyltransferase

DNA sequence : 
ATGAAACAACATCGATTTGAACACTGGTCCGAAATTAAGTATCTGAAGGATATCGTCACAAACCCGATGATAAGCGTAGG
AGAATACTCATACTATTCCGGTTATTACGATCATCATGATTTTGAAGATGGCTGCGTTAGGTATCTATGGGGGGATGCAA
AATCCAAAAGGTTGTTTAACCCCATTGAAGACTATGGTTGGCATATCGATAAATTGATTATCGGAAATTACGTATGCATC
GCAAGCGGCGTCATTATTTTAATGGGTGGAAATCACAACCATCATCCTGAATGGGTAACCGTATACCCGTTTGTCGATCA
GATTGAAGCTTCTTACGCGCCAAAAGGCGATACCGTCATCGAAAGCGATGCTTGGATTGGAATGAATGCCATGATTATGC
CAGGTGTGACCATTGGCGAAGGCGCCATTGTTGCGGCTGGTTCGGTTGTTACTAGAGATGTCCCGCCCTACAGTATCGTA
GGCGGTAACCCTGCCAAAGAGATAAAGAAACGCTTTGCGGACGAAGACATCGAAAAGTTAATGGAAATGCGATGGTACGA
TTGGGAACGCGAGCAAATTGAACGAGCAGCACATATCTTGTCCAGTTCTTCCGTCCAACGATTATATGACTATTATCAAA
AAGAAATAAAACCCTGCGTTTAA

Protein sequence : 
MKQHRFEHWSEIKYLKDIVTNPMISVGEYSYYSGYYDHHDFEDGCVRYLWGDAKSKRLFNPIEDYGWHIDKLIIGNYVCI
ASGVIILMGGNHNHHPEWVTVYPFVDQIEASYAPKGDTVIESDAWIGMNAMIMPGVTIGEGAIVAAGSVVTRDVPPYSIV
GGNPAKEIKKRFADEDIEKLMEMRWYDWEREQIERAAHILSSSSVQRLYDYYQKEIKPCV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 3e-31 46
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 3e-31 46
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 5e-32 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 4e-61 60
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase CP000675.2.gene50.p0 Protein 1e-42 48
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 2e-31 46
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 2e-31 46
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 2e-32 45
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 1e-32 45
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 3e-35 44
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 1e-33 42
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 1e-33 42
GYMC10_1214 YP_003241310.1 chloramphenicol acetyltransferase NC_011586.7045146.p0 Protein 6e-34 42