Gene Information

Name : GYMC10_1131 (GYMC10_1131)
Accession : YP_003241228.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1336077 - 1336949 bp
Length : 873 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gwc:GWCH70_1984 ABC transporter related

DNA sequence : 
ATGAATACGCTGGAAGCAAAGGGATTGGGTCTGTCCTACGGGGGAGACTTTATATTCGAAAATCTGGATTTAACCGTGCC
TATAGGTAAAATCACCGTGTTTATCGGCAGCAACGGCTGCGGCAAATCCACTTTGCTGCGCTCCATGGCCAGGCTGCTGA
AGCCGCAGCGCGGCTCGGTAGTACTAAACGGGGCCGACATCGCAAGCTTGTCCACCAAGGACGTTGCGCGGAAGCTCGCT
ATTTTGCCTCAAGGGCCAACGGCTCCGGAAGGACTGACGGTCATGCAGCTGGTGAAGCAAGGGCGCTATCCTTACCAGAG
CTGGCTGCGCCAATGGTCGCGGGAAGATGAAGAAGCGGTCACAGCAGCTCTGGAATCCACGGGACTGACCGAGCTGGCTG
ATCGTACAGTTGACTCGCTGTCAGGCGGCCAGCGGCAGCGGGCCTGGATTGCGATGACGCTGGCGCAGGAAACGCCGCTC
ATTCTGCTGGACGAACCGACCACCTATCTGGATTTAACGCACCAGATCGAAGTGCTGGATCTGCTGTACGACTTAAACGC
CAAAGAACAGCGGACCATCGTCATGGTGCTGCATGATATCAATCTGGCCTGCCGTTATGCCGACCATATCGTGGCCATCC
GCGACGGGAGCATCAAGGCTGAAGGCAAACCGGGAGATATCATCAATTCCGACTTGATGCAGACCGTGTTCCAGCTCCCA
TGCGAAATTATTCAGGACCCGCTGTACGGGACTCCGATGTGCGTTCCGCGCGGGAAGGGCAAACGCCGACCTTCGGCTGT
CCAGCCGAATACGGCAGAACCGAATCAACTAACAACAACTCCGACGCCCGCCCCTGAACTGGCAACGGTCTAG

Protein sequence : 
MNTLEAKGLGLSYGGDFIFENLDLTVPIGKITVFIGSNGCGKSTLLRSMARLLKPQRGSVVLNGADIASLSTKDVARKLA
ILPQGPTAPEGLTVMQLVKQGRYPYQSWLRQWSREDEEAVTAALESTGLTELADRTVDSLSGGQRQRAWIAMTLAQETPL
ILLDEPTTYLDLTHQIEVLDLLYDLNAKEQRTIVMVLHDINLACRYADHIVAIRDGSIKAEGKPGDIINSDLMQTVFQLP
CEIIQDPLYGTPMCVPRGKGKRRPSAVQPNTAEPNQLTTTPTPAPELATV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-60 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-60 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-62 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-56 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-59 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-59 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-59 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-59 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-52 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_1131 YP_003241228.1 ABC transporter-like protein BAC0164 Protein 6e-57 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_1131 YP_003241228.1 ABC transporter-like protein VFG0925 Protein 5e-66 50
GYMC10_1131 YP_003241228.1 ABC transporter-like protein VFG1042 Protein 6e-57 47