Gene Information

Name : GYMC10_0098 (GYMC10_0098)
Accession : YP_003240214.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 110513 - 110893 bp
Length : 381 bp
Strand : -
Note : PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH4037 cadmium-binding protein (cadmium efflux system accessory protein)

DNA sequence : 
ATGAATGTCCGAACAATGAAAGAGGACGTGGCTCTGGAGCTGTGTGAAACGGAATGTCCTTCAACCGAGAGGGTTGCTTT
GTTAAAAGAAACGGTTTCGGATGATGATATGCTCGGCATGGCCGAGATCTTCAAGGCGCTGGCCGACCCGACGCGGGTCA
AGGTAGCCTATATGCTGGACCGCGGCGAGTTATGCGTTTGCGACGTGGCTGAAGTTCTCGGAAGCTCCACCGCAACAGCC
TCCCATCATTTGCGCACGCTGAAGAACAAGAATATCGCCAAATCGCGCAAGGCGGGTAAGAATGTATACTATTCGCTAAA
AGACGACCATATCCGGACTTTGCTTCATATGACGCTGGAGCACCAGAAGGAGAGGGTGTAG

Protein sequence : 
MNVRTMKEDVALELCETECPSTERVALLKETVSDDDMLGMAEIFKALADPTRVKVAYMLDRGELCVCDVAEVLGSSTATA
SHHLRTLKNKNIAKSRKAGKNVYYSLKDDHIRTLLHMTLEHQKERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 2e-24 52
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 2e-24 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_0098 YP_003240214.1 ArsR family transcriptional regulator BAC0456 Protein 4e-17 45
GYMC10_0098 YP_003240214.1 ArsR family transcriptional regulator BAC0056 Protein 6e-20 44