Gene Information

Name : GYMC10_1023 (GYMC10_1023)
Accession : YP_003241127.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1206030 - 1206734 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_09800 ABC transporter ATP-binding protein

DNA sequence : 
GTGACAACGTTAATCGAATTTAAAAACGTAACCAAGGCCTATCCAATCGGCGAAGTGACGATTCAAGCCCTTGCGGGCGT
TGATTTCTCCATTTTAGAGGGGGAATTCGTCGTGATCCTAGGGGCCAGCGGGGCAGGGAAAAGCACGATTTTGAACATTC
TCGGCGGGATGGATACGGCTACCTCGGGACAAGTGTTTGTTGGAGATCAAGAGATTACGGGATGGAGCGAGAAGAGATTA
ACCGAATACCGCGGCGAGCAGGTTGGCTTCGTATTTCAATTCTATAACCTGATTCCGAATTTGAATGCGCTGGAGAACGT
GGAATTTGCGACAGAGGTATGTAAGCACCATTTGGATGCCCGTGATATTTTACATAAGGTTGGACTAACGGATCGTTTGA
AGAACTTCCCTTCCCAGCTCTCTGGCGGCGAACAGCAAAGAGTTGCGATCGCAAGAGCGGTTGCCAAGAATCCCGCGCTG
CTCCTCTGCGACGAACCCACCGGAGCTTTGGATTATGTGACAGGGAAATCGGTCTTAAAGCTGCTTCAAGATTTAAACCA
GGAAACGAAGACATGCGTAGTGCTGGTCACCCATAACTCGGCCATCGCGCCGATGGCGGATAAAGTGATCCGCGTCAAGA
GCGGGAAGATCGAGAGCATCACGATCAATGAGCACAAACAAAGCGTTGAAGGGATCGAGTGGTGA

Protein sequence : 
MTTLIEFKNVTKAYPIGEVTIQALAGVDFSILEGEFVVILGASGAGKSTILNILGGMDTATSGQVFVGDQEITGWSEKRL
TEYRGEQVGFVFQFYNLIPNLNALENVEFATEVCKHHLDARDILHKVGLTDRLKNFPSQLSGGEQQRVAIARAVAKNPAL
LLCDEPTGALDYVTGKSVLKLLQDLNQETKTCVVLVTHNSAIAPMADKVIRVKSGKIESITINEHKQSVEGIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_1023 YP_003241127.1 ABC transporter-like protein NC_012469.1.7685735. Protein 6e-60 54
GYMC10_1023 YP_003241127.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-44 46
GYMC10_1023 YP_003241127.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-37 42
GYMC10_1023 YP_003241127.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-41 42