Gene Information

Name : Adeg_2041 (Adeg_2041)
Accession : YP_003239969.1
Strain : Ammonifex degensii KC4
Genome accession: NC_013385
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 2036714 - 2038024 bp
Length : 1311 bp
Strand : -
Note : KEGG: gem:GM21_3919 ATPase, FliI/YscN family; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain pro

DNA sequence :
ATGACCCTGGGTATTTACCGGCGCCGGGTAGAGGAGGTACCCACCCTCTGCCAGCAGGTGGGGGTGGTGAGCAAGGTGGT
GGGGCTTACCCTGGAGGTCAAGGGGATAAAGCCCTTCGTGGGGGAGGTCTGCCTGGTGGAACTCTCTCCCGGGAAGTATG
TAGTGGCCGAGGCGGCCGGCTTCCGGGAGGATGTGGTTTTGCTTATGCCCTTCGGAGAGCTTACAGGAATAAGGCCCGGC
TGCCGCGTCTATCCGCGCCGCCGCCCCTTCACCGTGCGTGTAGGGGAACATCTTTTGGGGAGGGTACTCAACGGTCTGGG
GGAGCCCATCGATGGCAAGCCTCTTCCCTCCGGCATACCGCTGCCGGTCAACAACCGTCCTCCTTCCCCCTTGGCGCGGC
GCCGCATCGAGGAGGTCTTCGTCACCGGCGTGCGGGCGATCGACGCCTTCATCACTTGTGGCCGGGGGCAGAGGATAGGA
ATCTTCGCTGGTAGCGGCGTGGGAAAGAGTACTCTCTTGGGAATGATCGCCCGCTTCGGCAACGCCGACGTCAACGTCAT
CGCCCTGGTAGGGGAACGAGGGAGAGAGGTACTGGAGTTCATCGAGAAGGACCTGGGGGAAGAGGGGCTGGCCAAGTCGG
TAGTGGTAGTGGCCACCTCGGACGAACCGGCGCTTTTGCGGCTACGGGCAGCCTTCGTAGCCACCACCATCGCGGAGTAT
TTCCGGGACACAGGGAGGCACGTCCTTTTGCTCATGGACTCCCTCACTCGCTTCGCCCTCGCCCAGCGGGAAGTGGGGCT
GGCGGTGGGGGAGCCGCCCACCACCCGGGGCTACACACCTTCGGTCTTTGCCTTGCTCCCCCGCCTCCTGGAACGGGCGG
GCAATGCGGCCAAAGGCTCCATCACGGGTTTTTACACCGTCCTGGTGGAAGGGGACGACCTCAATGAGCCCATAACCGAC
GCCGCCCGCAGCATTCTGGACGGGCACATAGTCTTGAGCCGGCAACTAGCCCAGGCCAACCACTACCCGGCCATAGACGT
ACTTGCGAGCGTCAGCCGACTAATGAGCGCGGTGGTCACGCCGGAGCACCGGGAAGCAGCCGATCTTCTCCGGAGCCTGC
TGGCTGCCTACCGGCAGAACGAGGATCTCATCAACATCGGCGCTTATGTGTCTGGCTCCAACCCTACCGTGGACCGAGCC
ATTGCCCTCTATCCGGAACTTGTTGCCTTCCTCCGGCAGAAGCCGGAAGAGTACACCTCTTTCCCCGAGTGCGTGGCGAG
GCTTAAAGAGCTGGCGGAAAGGGGGAAGTAA

Protein sequence :
MTLGIYRRRVEEVPTLCQQVGVVSKVVGLTLEVKGIKPFVGEVCLVELSPGKYVVAEAAGFREDVVLLMPFGELTGIRPG
CRVYPRRRPFTVRVGEHLLGRVLNGLGEPIDGKPLPSGIPLPVNNRPPSPLARRRIEEVFVTGVRAIDAFITCGRGQRIG
IFAGSGVGKSTLLGMIARFGNADVNVIALVGERGREVLEFIEKDLGEEGLAKSVVVVATSDEPALLRLRAAFVATTIAEY
FRDTGRHVLLLMDSLTRFALAQREVGLAVGEPPTTRGYTPSVFALLPRLLERAGNAAKGSITGFYTVLVEGDDLNEPITD
AARSILDGHIVLSRQLAQANHYPAIDVLASVSRLMSAVVTPEHREAADLLRSLLAAYRQNEDLINIGAYVSGSNPTVDRA
IALYPELVAFLRQKPEEYTSFPECVARLKELAERGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-100 55
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-90 55
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-95 54
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 6e-97 54
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 6e-97 54
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-95 54
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-97 54
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-90 54
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-90 54
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-91 54
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 9e-91 54
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 4e-90 54
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-96 53
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-95 53
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-95 53
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-96 53
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-87 53
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 7e-87 53
escN AAL57542.1 EscN Virulence LEE Protein 1e-84 52
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-85 52
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-84 52
escN AAC31513.1 L0034 Virulence LEE Protein 4e-85 52
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-84 52
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 4e-85 52
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-84 52
escN AAC38383.1 EscN Virulence LEE Protein 1e-85 52
escN NP_290268.1 hypothetical protein Virulence LEE Protein 5e-85 52
unnamed AAL06369.1 EscN Virulence LEE Protein 8e-83 52
ECs4568 NP_312595.1 EscN Virulence LEE Protein 5e-85 52
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-84 52
escN AAK26715.1 EscN Virulence LEE Protein 1e-84 52
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-72 50
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 9e-73 50
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-71 49
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-72 49
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-75 48
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-68 47
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 6e-69 46
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 6e-69 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 5e-79 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-72 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 8e-72 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 8e-72 44
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-68 44
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 8e-68 44
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-68 44
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-68 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 6e-64 44
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-66 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 9e-64 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG2144 Protein 1e-101 56
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG0192 Protein 6e-101 55
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-96 55
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG0390 Protein 4e-98 54
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG1254 Protein 1e-98 54
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG0515 Protein 5e-91 54
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG0730 Protein 8e-86 52
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-85 52
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG2499 Protein 9e-98 52
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG2331 Protein 7e-96 50
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG1778 Protein 4e-71 46
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG0555 Protein 3e-68 44
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG2459 Protein 1e-67 44
Adeg_2041 YP_003239969.1 flagellar protein export ATPase FliI VFG1008 Protein 1e-64 42