Gene Information

Name : Adeg_2033 (Adeg_2033)
Accession : YP_003239961.1
Strain : Ammonifex degensii KC4
Genome accession: NC_013385
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2032059 - 2032730 bp
Length : 672 bp
Strand : -
Note : TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: gem:GM21_3908 flagellar biosynthetic protein FliP

DNA sequence : 
GTGCCTCCGATTAGCATCAGCATTGGCGGGACGGGTAGTCCCGCCCAGGTGATCGACGCGGTGAAGATACTACTTCTGCT
TACCGTGCTCTCTTTGGTGCCGGCCATTCTCATCCTCATGACCTCCTTCACCCGCATCGTGATCGTGCTTTCGCTTCTGC
GTAGCGCTTTAGGCACCCACCAGGCCCCTCCCAACCAGGTGCTGGTGGGGCTGGCCCTTTTCCTCACCGTCTTCATCATG
GCCCCGGTTTACGAGCGCATAAATCAGGAGGCGATAAGACCTTACTTAGCCAACCAGATAACTCGCCAGGAAGCGCAGGT
GAGGGGGCTCAGGCCCTTGAAAGAGTTCATGCTCCGGCAGGTGCGGGAGAAGGACCTGGCTTTGTTTGTTAACCTGGCCC
ATCTCCCCCAGCCGGTCAACAAAGAGGAGCTCCCCTTGCGGGTGATAATCCCCGCCTTCCTCATAAGCGAGCTCAAGACG
GCCTTCGCCATGGGCTTCCTCCTTTATCTGCCCTTCCTGGTAATCGACATGGTGGTGGCTAGCGTTCTTATGTCCATGGG
CATGTTCATGCTGCCGCCCGTGATGATTTCACTTCCGTTTAAGCTTCTGCTCTTCGTGCTGGTGGACGGCTGGTATCTGG
TGGTCAAGTCTCTGGTGGAGAGCTTTCACTAG

Protein sequence : 
MPPISISIGGTGSPAQVIDAVKILLLLTVLSLVPAILILMTSFTRIVIVLSLLRSALGTHQAPPNQVLVGLALFLTVFIM
APVYERINQEAIRPYLANQITRQEAQVRGLRPLKEFMLRQVREKDLALFVNLAHLPQPVNKEELPLRVIIPAFLISELKT
AFAMGFLLYLPFLVIDMVVASVLMSMGMFMLPPVMISLPFKLLLFVLVDGWYLVVKSLVESFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 5e-32 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 8e-32 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 5e-32 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 8e-32 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 43
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 5e-30 42
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 2e-30 42
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 2e-30 42
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 1e-30 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 5e-30 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 5e-31 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 5e-31 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 2e-20 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-30 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeg_2033 YP_003239961.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-54 60
Adeg_2033 YP_003239961.1 flagellar biosynthetic protein FliP VFG2494 Protein 6e-53 58
Adeg_2033 YP_003239961.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-55 55
Adeg_2033 YP_003239961.1 flagellar biosynthetic protein FliP VFG2016 Protein 2e-52 53
Adeg_2033 YP_003239961.1 flagellar biosynthetic protein FliP VFG0044 Protein 2e-35 44
Adeg_2033 YP_003239961.1 flagellar biosynthetic protein FliP VFG0519 Protein 6e-31 42
Adeg_2033 YP_003239961.1 flagellar biosynthetic protein FliP VFG0188 Protein 5e-32 41