Gene Information

Name : Adeg_1982 (Adeg_1982)
Accession : YP_003239911.1
Strain : Ammonifex degensii KC4
Genome accession: NC_013385
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1986548 - 1987660 bp
Length : 1113 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: gme:Gmet_1624 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deam

DNA sequence :
ATGGAGAACCTGAAAGAAGACGAATTTTTCATGCGGCGGGCCTTGGAGCTCGCCTTGAAGGCCCGGGGGAGGACCAGCCC
TAACCCCATGGTGGGGGCGGTGCTGGTCAAAGAGGGGCGCGTGATCGCCGAGGGTTACCACCGCCGGGCTGGGATGCCTC
ATGCCGAGATAGAAGCCCTGCGGGCGGCCGGGGAAGAGGCGCGGGGGGCCACGCTTTACGTCAACCTGGAGCCCTGCTGC
CATGTAGGACGCACCGGCCCCTGCACGGAGGCCATAATCGCCGCGGGGATAAAGCGGGTGGTGGTGGCCATGGAGGACCC
CAACCCTCTGGTGGCGGGGAAGGGGATAAAGATCTTGCGGGAAGCGGGGCTAGAAGTGACGGTGGGGGTCCTGGAGCAGG
AGGCCCGGCGGTTGAACGAGGTTTTTGTAAAGTTCATCACCACCCGCGAGCCTTTCGTGGTGCTCAAAGTGGCCATGACT
CTGGACGGCAAGATAGCCACCAGCACGGGGGAGGCCCGCTGGATAACAGGCCCGGAAGCCCGGGCTTACGTGCACGAGCT
GCGCGACACTTACGACGCCATACTGGTGGGGAAGGGTACGGTGCTGAAGGACGACCCTTCCTTGACCGCGCGCCTTCCAG
GGGCACGCGACCCGGTGCGGGTTATCCTTTCAAGCCTCGCCGACCTTCCCCTTTCCGCCCGGGTGCTCAACCTCAATTCC
TCTGCCCCCACCTGGGTAGCGGTCACGGAGCAGGCTCCTCCTTCTCGGATTAAGGCCTTGCAGGGTAAAGGAGCAGAAGT
ACTGGTGTGCGGTCCCGGCCCGCAGGTGGACTTGAAGCTTCTGCTCAAGGAGCTGGGCAGGCGGGAGATAACCGGCGTGC
TGGTAGAAGGGGGCGGGACGGTAAACGCCAGTTTCTTGGCGAACCGGCTGGTGGACAAGGTGATCTGGATGGTGGCGCCC
AAGATCTTCGGGGGGACGAAGGCCCCCGGGCCGGTGGGAGGGGAAGGGGTGGAGCACCCCGACCGGGCCCTGCGACTGAA
AGACTTAACGGTAAAAAAGCTGGGGGCCGATTTTTGTTTCGAGGGCTACCCGGAATACCCGGAGGAGAGGTAG

Protein sequence :
MENLKEDEFFMRRALELALKARGRTSPNPMVGAVLVKEGRVIAEGYHRRAGMPHAEIEALRAAGEEARGATLYVNLEPCC
HVGRTGPCTEAIIAAGIKRVVVAMEDPNPLVAGKGIKILREAGLEVTVGVLEQEARRLNEVFVKFITTREPFVVLKVAMT
LDGKIATSTGEARWITGPEARAYVHELRDTYDAILVGKGTVLKDDPSLTARLPGARDPVRVILSSLADLPLSARVLNLNS
SAPTWVAVTEQAPPSRIKALQGKGAEVLVCGPGPQVDLKLLLKELGRREITGVLVEGGGTVNASFLANRLVDKVIWMVAP
KIFGGTKAPGPVGGEGVEHPDRALRLKDLTVKKLGADFCFEGYPEYPEER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-43 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-43 41