Gene Information

Name : Adeg_1948 (Adeg_1948)
Accession : YP_003239877.1
Strain : Ammonifex degensii KC4
Genome accession: NC_013385
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1952685 - 1955123 bp
Length : 2439 bp
Strand : -
Note : PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: SORBIDRAFT_06g014590; hypothetical protein

DNA sequence :
ATGTTTGGGAGGTTTACCCGTAGGGCGCAGAAAGTTCTGCTCCTGGCTCAGGAAGAGGCGCGGCGCATGAATTACCCCTT
CGTCGGGACAGAGCATATTCTGCTGGGGCTTTTGCGCGAGGGCGAAGGGGTGGCGGCCAAGGTACTTCAGAACCTGGGGA
TAAGTGCCGACGCCGTGCGGGAGAAGGTGGAGCAGATAGTGGAGCGGGGGGAGGAGCCGGTACTGCACGAGGTTACCTTG
ACCCCGCGGGCAAAGCGGGTGCTGGAGTTGGCGGTGGACGAGGCGCGGCAGCTGGGGCATAACTATGTGGGTACCGAGCA
TCTGCTTCTAGGGCTCATCCGTGAGGGCGAAGGGGTAGCGGCCCAGGTTCTCACCATGTTCGGCGCCGATCTCGACAAGG
TGCGGGCCCAGGTGCTGGAGATGCTCAGCACCGGGACACCCGGCGCAGCCCAGGCGGGTCCTGCTGGCCGGAGCAAGACC
CCGCTCTTGGACCAGTTTGGCCGCGACCTCACCCGGCTGGCGCGGGAGGACCGGCTTGACCCTGTGGTAGGTCGGGAGAA
AGAAATCGAGCGGGTGATCCAAATCCTCAGCCGCCGCACCAAGAACAATCCTGTGCTCATAGGCGATCCCGGCGTGGGTA
AGACGGCTATCGTGGAGGGGCTGGCCCAGCGCATAGCCAAGGGTCAGGTGCCGGAGGTGCTGCTCAATAAGCGGGTGGTG
GCCCTGGACCTGGCTTCGGTGGTGGCTGGCACCAAGTACCGCGGTGAGTTCGAGGAAAGGCTAAAGAAAATCGTAGACGA
GATCAAGGCAGCAGGGAACGTGATCCTCTTCATTGACGAACTGCACACCATAGTAGGAGCCGGTGCCGCCGAAGGGGCCA
TAGATGCGGCCAACATTTTAAAGCCGGTCTTGGCGCGGGGGGAGCTGCAGACCATAGGCGCCACCACCTTGGATGAGTAC
CGGAAGCACATCGAGCGCGATCCGGCCCTGGAGCGCCGCTTCCAGCCGGTGATGGTGGGCGAGCCTACGGTGGAGGAAAC
CATCGCTATTCTCAAGGGCTTGCGCGACCGCTACGAGGCCCATCACCGGGTGCGCATAACGGACGAGGCCATAGAAGCTG
CGGCCAAGCTCTCCCACCGCTACATAACCGACCGCTTCCTGCCCGACAAGGCCATAGACCTCATCGACGAGGCGGCCTCG
AGGGTGCGCCTGCGGGCCTTCACTCCGCCGCCGGACCTTAAAGAGCTAGAGCAGAAGCTGGAGGAAATAAGGAAGGAGAA
GGAGGCGGCGGTGGCGGCTCAGGAGTTCGAGAAGGCGGCGCAGCTGCGGGACCAAGAGGCCAAGATCAAGGCGGAAATCG
AGGCCGCGCGCGAGGCCTGGCGGCAAAAGCAGAGTGACGGGGAATTGGTGGTGACAGCGGAGGATGTGGCCGAGGTGGTC
TCCAGCTGGACGGGAATCCCGGTGAAGCAGCTCAAGATGGAAGAGGCCGAGCGCCTGCTCAAGCTCGAGGAGATCCTGCA
CCAGCGCATCGTGGGGCAGGACGAAGCGGTGGCGGCAGTGGCGCGGGCCGTCCGGCGTGCCCGGGCGGGGCTCAAGGATC
CTCGGCGGCCCATCGGCGTCTTCATCTTCCTCGGACCTACCGGGGTGGGTAAGACGGAGCTGGCCAAGGCGCTGGCGGAA
GCCCTCTTCGGTGACGAAGAGGCTATGGTGCGCATCGACATGTCGGAGTACATGGAGCGGCACACCGTTTCCCGGTTGGT
GGGGGCACCTCCCGGCTACGTGGGCTACGAGGAGGGAGGGCAACTCACCGAGGCGGTCAGGCGTCGTCCCTACACGGTGG
TCCTCCTGGACGAGATCGAGAAGGCTCATCCTGATGTCTTCAACATCCTGCTGCAGATCATGGAGGACGGGCGCCTGACT
GACGCCAAGGGACGCACGGTGGACTTCAAGAACACGGTGATCATCATGACCTCCAACATCGGCGCCCGCTTCTTGAAGCG
GGAGTCGCCCTTGGGCTTCCGCGCGGAGGATGAGAAGGCAGCCTTCGAGTCGATGAAGGAAAAGATTCTGAAGGAGCTGG
AGCGCACCTTCCGCCCCGAGTTCCTCAACCGGGTGGATGAGATCATCGTCTTCCACCCCCTCACTCCCGAGCACATCCGG
GCCATCGTCGACCTCATGCTCAAGGACGTGGCCAAGCGCCTCAAGGAGCAGGGGGTGGAGGTGGAGTTCTCCGACGCCCT
GAAGGAGCTGCTGGCGCAGAAGGGATACGACGAGAACTTCGGTGCCCGACCCCTCAGGCGCACCATCCAGCGCCTGGTGG
AAGACAGGCTGTCGGAAGAGATGCTCAAGGGCACCTTTGCCAAAGGGGATAAAGTGCTGGTGGATGCGGAGAACGGCGAA
GTGGTGGTGAAGCGGGAGCCAGTGGGGGCCGGAGCATAA

Protein sequence :
MFGRFTRRAQKVLLLAQEEARRMNYPFVGTEHILLGLLREGEGVAAKVLQNLGISADAVREKVEQIVERGEEPVLHEVTL
TPRAKRVLELAVDEARQLGHNYVGTEHLLLGLIREGEGVAAQVLTMFGADLDKVRAQVLEMLSTGTPGAAQAGPAGRSKT
PLLDQFGRDLTRLAREDRLDPVVGREKEIERVIQILSRRTKNNPVLIGDPGVGKTAIVEGLAQRIAKGQVPEVLLNKRVV
ALDLASVVAGTKYRGEFEERLKKIVDEIKAAGNVILFIDELHTIVGAGAAEGAIDAANILKPVLARGELQTIGATTLDEY
RKHIERDPALERRFQPVMVGEPTVEETIAILKGLRDRYEAHHRVRITDEAIEAAAKLSHRYITDRFLPDKAIDLIDEAAS
RVRLRAFTPPPDLKELEQKLEEIRKEKEAAVAAQEFEKAAQLRDQEAKIKAEIEAAREAWRQKQSDGELVVTAEDVAEVV
SSWTGIPVKQLKMEEAERLLKLEEILHQRIVGQDEAVAAVARAVRRARAGLKDPRRPIGVFIFLGPTGVGKTELAKALAE
ALFGDEEAMVRIDMSEYMERHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNILLQIMEDGRLT
DAKGRTVDFKNTVIIMTSNIGARFLKRESPLGFRAEDEKAAFESMKEKILKELERTFRPEFLNRVDEIIVFHPLTPEHIR
AIVDLMLKDVAKRLKEQGVEVEFSDALKELLAQKGYDENFGARPLRRTIQRLVEDRLSEEMLKGTFAKGDKVLVDAENGE
VVVKREPVGAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeg_1948 YP_003239877.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 64
Adeg_1948 YP_003239877.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 3e-138 53