|
Name : Adeg_1925 (Adeg_1925) Accession : YP_003239855.1 Strain : Ammonifex degensii KC4 Genome accession: NC_013385 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1931816 - 1934413 bp Length : 2598 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAGCAACCTCACGCCGATGATGCAGCAGTACCTGGAGATAAAAAAGCAGTATCCTGATGCCATCCTTTTCTTCCACCT GGGCGACTTTTACGAAATGTTCTTCGAGGACGCGGTTAAGGCGGCTCCCATCCTGGAGGTGGCCCTCACCTCCCGGGACG CAGGCCGTCTCGGCAGAGTTCCCATGTGCGGCGTCCCCTGTCACAGTGCCTCTTCCTACATTGCCCGCTTGGTGAGCCAC GGCTTCAAAGTGGCCCTGTGCGAGCAACTGGAAGATCCCTCTCAGGCCAAGGGTCTGGTGAAGCGAGGAGTAACGCGGGT CATAACTCCCGGAACCTTTTTCGAAGGGGAAACGGCCGACAAGACCAGCCACAGTTATGTAGTAGCCGTAGCCCCCGGGA GCGGGAAGACCTACGGCTTGGCCAGTGCCGAGGTCGGTACCGGGGAGTTCCGCGTGACTAGTTTCACCGGGGCGGGAGCG CAGGACAAGCTCATGGACGAACTCTTCCGGCTGCAGCCGGCCGAGGTGGTGCTTCCCGAAGGTAACGAAGAACTCAAGCA CCTGGTGCGGGCGGCGGTACCTGCGGCAGCGCTTACCTTCTGGCCGCAGGAACTCTTCCGGGATCTTGCCCGGGCCAAAG CTGCCTTAGAGGGCTACGAGCGGGAAGGGGAGTGGGAAACGGAGGCTGTCTTAGCGGCGGGGGTGCTGGCCGCCTACCTG GCCGAGACCCAGAAGCGGGAACTCAAGCATCTGAAGAAGATCTCTTCCTACCGCCCCGAAGGCTTCATGCTCCTGGACGC GGCCACTAGACGCAATCTGGAGCTTACCCGCTCTCTGGCCGACGGGAGCCGGCGGGGAACCCTGCTGGAGGTTTTGGATT ACACTTTGACCGGCATGGGGGGAAGGCGCCTGCGCGACTGGATAGAGCAGCCCCTCCTCGACCCGGCGGCCATAGAAGAG CGCCTAGAAGCGGTGGCCTACTTGGTAGAGCAGGCGGTAGAGCGAGAGGAGATCCGGGCCCGGCTCAAAAAGATGGGTGA CATAGAACGTCTGGCTTCCCGCCTATCTTTTGGCCTGGCTAATGCCCGCGATCTTCTCAGCTTGAAGGACTCCTTGATCC TAGCCGGGGAGATAAAGGAGAGACTGTCCGGGGCAGAGGGGCTGCTGGGGAGGCTGCGGGATCAACTGGAAAACCTTGAC GATATCGCCTCCCTTATCGCGGAGGCCATTGCCCCTGACCCTCCGGCTACCCTTCAAGAAGGTGGGCTTATTCGAGAAGG GTACCACCCGGAGGTGGACCGGCTGCGGGCTATCCGGCGTGACGCCCACAAGTACTTGGCGGAACTTGAGGCCAAAGAAA AAGAGCGGACGGGCATAAAGTCTCTCAAAATAGGGTACAACCGGGTTTTCGGTTACTATATAGAGGTCACCAAGCCCAAC CTACACCTGGTTCCTCCGGATTATCAGCGGCGCCAGACGCTCACCCAGGCAGAACGCTTCATAACCCCTGAACTCAAAGA GTATGAAGAGATGATCCTGGGGGCGGAAGAGCGCCTTTACTCCCTAGAGTACGAACTCTTCTGCCAGGTACGGGATCAAG TGCAGGCTCATCTTGACCGCATTTTGCGGGCCGCGCGCGCTATAGGACAGATCGACGCCTTGGCAAGCCTGGCAGTGGCT GCCCTGAAGGGCAACTATGTGCGCCCCCGCGTCTCGTCTTCCGACATTATCCGCATAAAAGAAGGCCGCCACCCGGTGGT GGAGCGAGCTTTAGGGCCGGGAAACTTCGTGCCCAACGACACTTGGCTTGGGGGGCCAGATAAGCGGGTAGCCATTATAA CCGGGCCCAACATGGGGGGCAAAAGCACCTACATGCGCCAGGTGGCCCTGATCGTGCTGATGGCGCAGATAGGGAGCTTT GTTCCGGCGGCGGAAGCGGAGATCGGGGTGGTGGACCGTATCTTTACCCGCGTGGGGGCAGCTGACAACCTCTACGGTGG GCAGAGCACCTTTATGGTGGAGATGGGTGAGTGCCGCACCATCCTGACCCAGGCCACTTCCCGGAGCCTTGTGGTCATGG ACGAAGTGGGGCGAGGGACTAGCACCTACGACGGTATGAGCATCGCCCGCGCCATCGTGGAATACCTCGTCCACCGGATA AAAGCCAAGACCCTTTTCTCTACCCACTACCACGAACTCACCGATCTGGCCCGGCTTCCCGGCGTTTTTAACCTGACGGT GGCGGTGCGCGAGGAAGCAGGGAGGGTTAGTTTCCTCTACCGGGTGCTACCGGGCAAAGCCGACAAGAGCTACGGGCTGC ACGTGGCGGCTCTGGCCGGCCTGCCGAAAGAAGTTATAGAGCGCGCCAAGGAGATCCTGGAGGAGCTGGAGAGGCGGCAG GAGAAAAAGCTTGAAAAACCTTGCCGGGTAGTGCAGCTCGACATGTTTTCCTGCGGAGTAGAACATCCACTGCTGGCAGA GCTTGCCCGCCTCGATCTCGACCAAGTCACCCCCCTACAGGCCTTGAACCTGCTGGCCGAGTGGCAGGAGCGGCTCAAAG CCGAGGGGAAACGGCGAGGGGGGAGGCGGCGTGGGTAA Protein sequence : MSNLTPMMQQYLEIKKQYPDAILFFHLGDFYEMFFEDAVKAAPILEVALTSRDAGRLGRVPMCGVPCHSASSYIARLVSH GFKVALCEQLEDPSQAKGLVKRGVTRVITPGTFFEGETADKTSHSYVVAVAPGSGKTYGLASAEVGTGEFRVTSFTGAGA QDKLMDELFRLQPAEVVLPEGNEELKHLVRAAVPAAALTFWPQELFRDLARAKAALEGYEREGEWETEAVLAAGVLAAYL AETQKRELKHLKKISSYRPEGFMLLDAATRRNLELTRSLADGSRRGTLLEVLDYTLTGMGGRRLRDWIEQPLLDPAAIEE RLEAVAYLVEQAVEREEIRARLKKMGDIERLASRLSFGLANARDLLSLKDSLILAGEIKERLSGAEGLLGRLRDQLENLD DIASLIAEAIAPDPPATLQEGGLIREGYHPEVDRLRAIRRDAHKYLAELEAKEKERTGIKSLKIGYNRVFGYYIEVTKPN LHLVPPDYQRRQTLTQAERFITPELKEYEEMILGAEERLYSLEYELFCQVRDQVQAHLDRILRAARAIGQIDALASLAVA ALKGNYVRPRVSSSDIIRIKEGRHPVVERALGPGNFVPNDTWLGGPDKRVAIITGPNMGGKSTYMRQVALIVLMAQIGSF VPAAEAEIGVVDRIFTRVGAADNLYGGQSTFMVEMGECRTILTQATSRSLVVMDEVGRGTSTYDGMSIARAIVEYLVHRI KAKTLFSTHYHELTDLARLPGVFNLTVAVREEAGRVSFLYRVLPGKADKSYGLHVAALAGLPKEVIERAKEILEELERRQ EKKLEKPCRVVQLDMFSCGVEHPLLAELARLDLDQVTPLQALNLLAEWQERLKAEGKRRGGRRRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 4e-130 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Adeg_1925 | YP_003239855.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-142 | 42 |
