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Name : Adeg_1725 (Adeg_1725) Accession : YP_003239667.1 Strain : Ammonifex degensii KC4 Genome accession: NC_013385 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1715543 - 1717204 bp Length : 1662 bp Strand : - Note : KEGG: scl:sce4467 type IV pilus biogenesis protein PilB; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase DNA sequence : TTGGCGCAAAACAGAAAAAAGCGCCTCGGCGAGAGGCTCGTAGAAGAGGGCCTCATAACGCGGGAGCAGCTGGAGGAAGC TTTAAAGATCCAGGCCCGCACGGGAGAACTCTTGGGCCAGGTACTGGTGCGCATGGGCGCGATAAGCGAGGAAGACCTCA ACCGGGTGCTGGGAATAAGCTCTTCTGCCACCAAGGAGTTGCAGGTATCTCCTGAACTTTTAAAGCTTGTGCCCGAGGAC CTGGCTCGCAGCCGCAAGGTTTTCCCCTTAAAGAAAGAAGGAAACCGGCTTTTTCTCCTCATGGCCAACCCGCTGGACAT CACCACCATCGACGACCTGAGGCTCTGGACGGGCTTGGAAATCGAGCCGGTGAAGGCCGAGGAGAGGGAAATAAGGGCGC TCATCAACCGCCACTACGGCCTGCCTGAAGTGGAAAGGGCTCTGGAAGAGCTCGGGGTTTCGGCCGAAGAGACGGAGATA GAGGAAGCTTTAGTGGACCGAGCTCCTATTGTGCAGTTGGTCAACTCCCTGATTTCCGGGGCGGTGGACGAGCAGGCCAG CGACATTCACGTGGAGCCTTTTGAAAACGAGGTGCGGGTGCGTTACCGGGTGGACGGCATTTTGCACGAGGTCATGCGCC TCCCGCGCCGTATGGCCCCGGCCCTGGTAGCCCGCATCAAGATCATGGCTAATATGGACATTGCCGAGCGCCGCCTTCCC CAGGACGGCCGCATCCTCACGCGAGTAGGCGGAAAGGAGCTGGATCTTCGGGTTTCCACCTTTCCCACCATCTTCGGGGA AAAGGTGGTAATAAGGCTGCTCGATAAGGAGCAGCTGAAAAGCTTTACCCTGGAAAACCTGGGCTTCTCACCCCAGAACC TGGCCACTTTTAAAAACTTCCTGCACAGCTCCTACGGTATGGTCCTGCTCACCGGCCCCACCGGCTCGGGCAAGACCACT ACCCTTTACGCGGCCCTGGCTTATCTCAACAGCGTGGAGAAAAACATTGTCACCGTGGAAGACCCGGTGGAGTATGTACT GGAGGGGATAAACCAGGCGCAGGTGAATGTCAAGGCAGGGGCTACTTTTGCTACCTACCTCCGTTCCATCCTGCGGCAGG ATCCGGATATCATTATGGTAGGGGAGATCCGGGACCTGGAGACGGCGGAGATCGCCGTGCAGGCGGCCACCACCGGGCAC CTGGTCCTCTCCACCTTACACACCAACGACGCTCCTGGGGCGCTTACCCGCCTTCTGGACATGGGAGTGGAGCCTTTCAT GGTAGCCTCTTCGGTTCTGGGGGTGGTGGCGCAGCGCCTGGTGCGCACCATCTGTCCCCGCTGCCGCGAGCCTCACGAGC CTTCCGAACCGGAACTGGCCTTCCTGGGCAAAGAAAGGCTCAACGGCCCTATTTACCGGGGGCGCGGGTGCGATTACTGC CGCCACACCGGCTACCGCGGGAGGGTGGCAGTGCACGAGGTGTTGCGGGTTTCTCCTCGCCTCCAGCGCCTGGTCCTGAA CAAGGCTTCCACCGAGGAACTGCGCCGGGCGGCTTTGCAGGAAGGGATGATCTCGCTCAAGGAAGACGCGGTGAGCAAGG TTCTGCAGGGCATCACCTCTGTAGCCGAGGTCATGCGGGTCCTTTACCAGGAAGGAGGCTAA Protein sequence : MAQNRKKRLGERLVEEGLITREQLEEALKIQARTGELLGQVLVRMGAISEEDLNRVLGISSSATKELQVSPELLKLVPED LARSRKVFPLKKEGNRLFLLMANPLDITTIDDLRLWTGLEIEPVKAEEREIRALINRHYGLPEVERALEELGVSAEETEI EEALVDRAPIVQLVNSLISGAVDEQASDIHVEPFENEVRVRYRVDGILHEVMRLPRRMAPALVARIKIMANMDIAERRLP QDGRILTRVGGKELDLRVSTFPTIFGEKVVIRLLDKEQLKSFTLENLGFSPQNLATFKNFLHSSYGMVLLTGPTGSGKTT TLYAALAYLNSVEKNIVTVEDPVEYVLEGINQAQVNVKAGATFATYLRSILRQDPDIIMVGEIRDLETAEIAVQAATTGH LVLSTLHTNDAPGALTRLLDMGVEPFMVASSVLGVVAQRLVRTICPRCREPHEPSEPELAFLGKERLNGPIYRGRGCDYC RHTGYRGRVAVHEVLRVSPRLQRLVLNKASTEELRRAALQEGMISLKEDAVSKVLQGITSVAEVMRVLYQEGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-97 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-97 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Adeg_1725 | YP_003239667.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-96 | 53 |
| Adeg_1725 | YP_003239667.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-94 | 50 |
| Adeg_1725 | YP_003239667.1 | general secretory pathway protein E | VFG2048 | Protein | 3e-98 | 49 |
| Adeg_1725 | YP_003239667.1 | general secretory pathway protein E | VFG1880 | Protein | 1e-92 | 46 |
| Adeg_1725 | YP_003239667.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-95 | 44 |
| Adeg_1725 | YP_003239667.1 | general secretory pathway protein E | VFG0233 | Protein | 4e-88 | 41 |
