|
Name : Adeg_1647 (Adeg_1647) Accession : YP_003239590.1 Strain : Ammonifex degensii KC4 Genome accession: NC_013385 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1636170 - 1637639 bp Length : 1470 bp Strand : - Note : KEGG: gsu:GSU2271 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGCCGGAGATTTTGCCCGAACTTAACGACCTCATCCGAGTAAGATACGAGAAACTGGAGGAGCTTAAAGCTCAAGGAAT AGAACCCTACGGCGGTCGTTATGAGCGCACCCACCTGGCGGAGGAGGTGCGCGAACGTTTTTCCGAGCTTGAGGGCCAGG AGGTGAGCCTGGCCGGGCGTATTATGGCCCGGCGCAGCCACGGCAAGGTGACTTTTGCCGACCTCCAGGACTTCTCCGGG CGCATCCAGATAATGGTACGCCAGGACGCCGTAGGTCCGGAGGCTTACGAAATCTTCAAGAAACTGGACCTGGGCGACAT CATCGGGGTGAAAGGGAGCGTTTTTAAGACGCGCACCGGCGAGATAACTATAGCGGTGGCGCGTTTTGAGCTTCTGGCCA AGAGCCTGCGCCCGCTGCCGGAGAAGTGGCATGGACTAAAGGACGTAGACCTGCGCTACCGCCAGCGCTACCTCGATCTC ATCGTTAACCCGGAAGTGAAGAGGATATTTATCCTGCGCAGCCAGATAATCCGGGCCATCAGGCGCTTCCTGGACGAGCG CGGCTTTCTAGAAGTGGAAACGCCCATGATGCAACCGGTGCCAGGAGGAGCGGCGGCGCGCCCCTTCATTACCTACCACA ACGCCCTGGAGATGCAGCTTTACCTCCGCATAGCCCCGGAGCTTTACCTCAAGCGGCTGCTGGTGGGCGGGTTTGAAAAG GTTTACGAGATCAACCGTAACTTCCGCAACGAAGGGATTTCGACCAGGCACAACCCGGAGTTCACCATGCTGGAGCTTTA CCAGGCCTACGCCGACTACCAGGACATGTTAAAGCTTACCGAGGAACTCATCACCTGGGTGGCAAAAGAGGTCCTGGGAA CCTGGCAGATAAAGTATGGGGAGGCGGAGATAGATCTTTCTCCCCCGTGGCGGCGGATTTCCCTCCTGGAGGCAGTCCGG CAGAAGACCGGGATCGATTTTGCTTCTCTTGAAGCGGACGAGGCCAGGGAAGCAGCTGAAAGGCTGGGGGTGGAGCTCAA AGGGAAGACGTTGTGGGGGGAGATCGTCAACGAGGTGTTCGAGGAACTTGTAGAGCCGGAGCTCATTAACCCCACCTTCG TCCTCGATTACCCGGTGGACATCTCTCCTCTGGCCAAGCGCAAGAAGGAAGACCCCCGGCTTACCTACCGTTTCGAACTC TTCATCGGGGGAAGGGAAATCGCCAACGCCTTCTCCGAGCTCAACGACCCGCTGGACCAGCGGGAAAGGTTTTTGCAGCA GCTGGAGAGGCGAAGGGCGGGGGACGAGGAGGCCCACATGTTCGACGAAGACTTCCTGGTGGCGTTGGAATACGGCATGC CGCCGGCAGGAGGATTGGGCATCGGAATCGACCGCCTGGTCATGCTGCTCACCAATTCCCCCTCTATCCGCGAGGTCATC CTTTTCCCCTTGCACCGCCCGCGCGATTGA Protein sequence : MPEILPELNDLIRVRYEKLEELKAQGIEPYGGRYERTHLAEEVRERFSELEGQEVSLAGRIMARRSHGKVTFADLQDFSG RIQIMVRQDAVGPEAYEIFKKLDLGDIIGVKGSVFKTRTGEITIAVARFELLAKSLRPLPEKWHGLKDVDLRYRQRYLDL IVNPEVKRIFILRSQIIRAIRRFLDERGFLEVETPMMQPVPGGAAARPFITYHNALEMQLYLRIAPELYLKRLLVGGFEK VYEINRNFRNEGISTRHNPEFTMLELYQAYADYQDMLKLTEELITWVAKEVLGTWQIKYGEAEIDLSPPWRRISLLEAVR QKTGIDFASLEADEAREAAERLGVELKGKTLWGEIVNEVFEELVEPELINPTFVLDYPVDISPLAKRKKEDPRLTYRFEL FIGGREIANAFSELNDPLDQRERFLQQLERRRAGDEEAHMFDEDFLVALEYGMPPAGGLGIGIDRLVMLLTNSPSIREVI LFPLHRPRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-114 | 52 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-87 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Adeg_1647 | YP_003239590.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-115 | 52 |
