Gene Information

Name : Adeg_1320 (Adeg_1320)
Accession : YP_003239277.1
Strain : Ammonifex degensii KC4
Genome accession: NC_013385
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1322512 - 1323420 bp
Length : 909 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: neu:NE1458 phage integrase domain/SAM domain-containing protein

DNA sequence :
ATGCTGGAGAAGTGGCTGGAGGAGTTTTTGGAGTTTTTGCGGGTGGAGCGGGGCCTGGCAGATAACACCATAGCCGCCTA
CCGTACCGACCTCAAGCACTTTTGCGCTTTCGTGGCCCGGCGCCAGTTTTCCCTGGATCCCTCTTCTTTGCGCGACGCCT
GCCTTTGCTACCTTTACGAACTTAATGCCGCCGGATATCTGGCTTCCACGGTGGCTCGGCGCTTGGCGGCCCTCAAATCT
TTCTGCGCCTACTTGGCGACCCAGGCTGGCTACCTGCCCTGGGATCCGGCAGAAGAACTTTCCTCTCCCAAGATCCCCGA
GCGGCTGCCCAAGGTGCTGCGCCCGGAGGAAGTGGAGCGCCTGCTCACCGCTCCCCGGACCAACACTCCTCAGGGGTTGA
GAGATAGGGCTTTGCTGGAGCTGGCCTACGCCACAGGGATGCGGGTGTCGGAGCTTGTGGGGCTGGATGTGGACCACCTT
AACCTGGAGGCGGGCTACGTGCGTGTTTTAGGCAAGGGAGGAAAGGAGCGGATAGTGCCGGTAGGGAGGGTGGCGCAGCA
TTACCTGAGGGAATACCTAGAGAAGGCCTGGCCCCGCCTGGTGAAAGATCGTCGCACTTCCGCCCTCTTTGTTAATCGCC
GGGGCGGAAGGCTCACCCGGCAAGCGGTCTTCAAGCTTTTAAAAGATTATGCCCGCCAGGCTGGCCTGACTTCGGCCCCT
TCTCCTCACACTTTACGCCACTCCTTTGCCACCCATCTTTTAGAGAACGGGGCCGATCTGCGGGTGGTCCAGGAGCTCTT
GGGCCACGTTTCCATCAGTACTACTCAAATTTACACTCATCTCACTTCGACCAGGGTGCGTGAGGTGTACCGGCGGGCCC
ACCCGCGTTCCCGGAAAACGGAGCCTTAA

Protein sequence :
MLEKWLEEFLEFLRVERGLADNTIAAYRTDLKHFCAFVARRQFSLDPSSLRDACLCYLYELNAAGYLASTVARRLAALKS
FCAYLATQAGYLPWDPAEELSSPKIPERLPKVLRPEEVERLLTAPRTNTPQGLRDRALLELAYATGMRVSELVGLDVDHL
NLEAGYVRVLGKGGKERIVPVGRVAQHYLREYLEKAWPRLVKDRRTSALFVNRRGGRLTRQAVFKLLKDYARQAGLTSAP
SPHTLRHSFATHLLENGADLRVVQELLGHVSISTTQIYTHLTSTRVREVYRRAHPRSRKTEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-42 48
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-42 48