|
Name : Adeg_0011 (Adeg_0011) Accession : YP_003238038.1 Strain : Ammonifex degensii KC4 Genome accession: NC_013385 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 12900 - 14183 bp Length : 1284 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; KEGG: gme:Gmet_3528 seryl-tRNA synthetase DNA sequence : GTGCTGGACCTCAAGTTCATTCGCCGACAGCCGGAAGTGGTGAAGGAGGCTTTGCGCCGCCGGGGCTACCCGGAGAATCT GGTGGACGAGCTTTTGGCGGTGGATGCCCGCTGGCGGGAGAAGCTCACCTACCTGCAAGAGCTCCGCAGCGAGCACAACC GGGTGTCGGAAGAAATAGCGCGGCGCAAGCAAGCCGGGGACGAGGCCGTGGAGCTTATAGCCGCCATGCGGGAGCTGAGT GACCGCATTGAGGATCTGGCAAAGGAAGTAGGAGCGCTGGAGCGGGAGCTCCAGGAACGTCTGCTGGAAATCCCTAACAT TCCTCACCCTTCCGTTCCCTACGGCGAGGACGCTGAGGACAACGTCGAGGTCAGGCGCTGGGGGGAGCCGCGCCGCTTCT CCTTCCCTCCACGCCCTCACTGGGAGATAGGCGAAATCACCGGGGTGCTCGACTTTGCCCGGGGCGTAAAGGTAGCTGGG ACGCGCTTCGTCTTCTACCGCGGGCTGGGTGCGGCTCTGGAGCGGGCGCTCATCAACTTCATGCTCGATCTGCACACGCG CGAGCACGGCTATGAGGAGGTCTTTCCTCCCTTCCTGGTTAACCGGGAGAGCATGGTGGGAACGGGACAGCTGCCCAAGT TTGCCGAGGACATGTTCAAGGTGGAGGGGGAGGATTTCTACCTCATCCCTACCGCTGAGGTACCGGTGACCAACCTGCAC CGGGAGGAAATTCTGGACGGGGGCCAGTTGCCCCTCAAATATGTGGCCTACAGTGCCTGCTTCCGGGCTGAGGCGGGAGC GGCGGGACGGGAGACCCGGGGGCTCATCCGCCAGCACCAGTTCAATAAGGTGGAGTTGGTGAAGTTTTGCCGCCCGGAGC AGTCGGAGGAAGAGCTAGAGAAGCTGGTGGCAGATGCCGAGGAAGTGCTGAAGCGCCTGGGACTTCCTTACCGGGTGGTG GTGCTCTGTACCGGTGATCTGGGCTTTGCTGCGGCCAAGACTTATGATATCGAGGTGTGGCTGCCTAGCTACGGCGCCTA TAAGGAGATCTCTTCCTGCTCTAACTTCGGCGACTTCCAGGCGCGGCGGGCCAATATCCGCTACCGCCCCCACCCCAAGG CTAAAGCCGCTTTTGTCCACACTCTAAACGGTTCTGGCCTGGCGGTGGGGCGTACGGTGGCCGCTATCCTGGAGAACTAC CAGGAGGAAGACGGCTCGGTCGTTATTCCCCCCGCGTTGCGTCCCTACATGGGTGGGGTGGAGCGCATCCCGGCTCAAAA GTAA Protein sequence : MLDLKFIRRQPEVVKEALRRRGYPENLVDELLAVDARWREKLTYLQELRSEHNRVSEEIARRKQAGDEAVELIAAMRELS DRIEDLAKEVGALERELQERLLEIPNIPHPSVPYGEDAEDNVEVRRWGEPRRFSFPPRPHWEIGEITGVLDFARGVKVAG TRFVFYRGLGAALERALINFMLDLHTREHGYEEVFPPFLVNRESMVGTGQLPKFAEDMFKVEGEDFYLIPTAEVPVTNLH REEILDGGQLPLKYVAYSACFRAEAGAAGRETRGLIRQHQFNKVELVKFCRPEQSEEELEKLVADAEEVLKRLGLPYRVV VLCTGDLGFAAAKTYDIEVWLPSYGAYKEISSCSNFGDFQARRANIRYRPHPKAKAAFVHTLNGSGLAVGRTVAAILENY QEEDGSVVIPPALRPYMGGVERIPAQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-112 | 58 |
