Gene Information

Name : ECO26_p1-15 (ECO26_p1-15)
Accession : YP_003237853.1
Strain :
Genome accession: NC_013369
Putative virulence/resistance : Unknown
Product : IS600 transposase OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 11579 - 12397 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTCAGACAGAAAACAAAGTGA
TGAGCGGCTAAAACTGGAGATTAAGGTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGC
TGGCAGAGAATGGCATCATCGTTGGTCGTGACCGACTGGCACGTCTTCGTAAGGAGCTAAGGCTACGCTGTAAGCAGAAA
CGCAAGTTCAGAGCGACTACGAACTCGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTAC
AGCACCAAATCAGGTCTGGGTGGCGGACCTGACGTATGTTGCCACACAGGAGGGATGGTTGTACCTCGCTGGCATCAAAG
ATGTTTATACGTGCGAAATTGTCGGCTACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCTCTGTTTATG
GCGCTCAGGAGCCAGCGCCCACCTGCCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCG
GGTCATACAGGAGCAGTTTGGTCTGAAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCT
TCTGGGGAACGCTGAAAAATGAGAGCCTGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAA
TACATTGAGATTTTCTACAATCGTCAGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATA
TCATCAGATGGCTGCTTAA

Protein sequence :
MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQK
RKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIRE
YIEIFYNRQRRHSRLGNISPAAFREKYHQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-113 99
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-114 99
unnamed AAF09022.1 unknown Not tested SHI-O Protein 7e-114 99
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-114 99
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-114 99
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-114 99
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-114 99
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-114 99
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-114 99
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-44 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-44 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-44 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-41 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-42 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-42 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 6e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_p1-15 YP_003237853.1 IS600 transposase OrfB VFG1706 Protein 6e-115 99
ECO26_p1-15 YP_003237853.1 IS600 transposase OrfB VFG1631 Protein 3e-41 42