Gene Information

Name : hlyC (ECO111_p3-01)
Accession : YP_003237750.1
Strain :
Genome accession: NC_013366
Putative virulence/resistance : Virulence
Product : hemolysin C
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2994
EC number : -
Position : 1 - 516 bp
Length : 516 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATCTAATGCTTTTGACGTCATGGGGAAGGTTGCATGGCTATGGGCCTGTTCTCCTCTGCATAAAAAATGGCCATT
ATCTGTTTTTGCTATTAATGTCATACCTGCTATTCAGACAAATCAATTTGCTCTCTTAATAAAGGATGAGCTTCCTGTAG
CTTTTTGTAGCTGGGCCAGTTTAGATCTGGAATGTGAGGTAAAATATATAAATGATGTAACATCTTTGTATGCAAAAGAC
TGGATGTCGGGAGAAAGAAAGTGGTTTATTGACTGGATAGCTCCATTTGGACACAACATGGAGTTATATAAATACATGAG
GAAAAAGTATCCTTATGAGTTATTCAGAGCAATAAGGTTAGATGAGAGCAGTAAAACAGGAAAAATAGCTGAATTTCATG
GAGGGGGGATAGATAAAAAACTGGCATCAAAAATATTCAGGCAATACCATCATGAACTTATGTCTGAAGTAAAAAACAGA
CAAGATTTTAATTTTAATATTGAGAAAGAAAACTAA

Protein sequence : 
MKSNAFDVMGKVAWLWACSPLHKKWPLSVFAINVIPAIQTNQFALLIKDELPVAFCSWASLDLECEVKYINDVTSLYAKD
WMSGERKWFIDWIAPFGHNMELYKYMRKKYPYELFRAIRLDESSKTGKIAEFHGGGIDKKLASKIFRQYHHELMSEVKNR
QDFNFNIEKEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 8e-57 68
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 4e-57 68
hlyC NP_755444.1 hemolysin C Virulence PAI I CFT073 Protein 2e-55 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyC YP_003237750.1 hemolysin C VFG0842 Protein 3e-77 100
hlyC YP_003237750.1 hemolysin C VFG1559 Protein 3e-57 68
hlyC YP_003237750.1 hemolysin C VFG1499 Protein 2e-57 68
hlyC YP_003237750.1 hemolysin C VFG0905 Protein 6e-56 67