Gene Information

Name : ECO111_0574 (ECO111_0574)
Accession : YP_003233099.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Unknown
Product : putative IS602 transposase OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 611435 - 612061 bp
Length : 627 bp
Strand : +
Note : Prophage ECO111_P01

DNA sequence :
ATGAAATATCTGAACCTGAGCAGTTGTCAGCCCGGAAAACATCAGTATAAAAATGCCCGTCAGGAGCATACCAGCCTGCC
GAATCTGCTTGAGCGTCAGTTCGCAGTACCGGAGCCAGACCGGGTATGGTGTGGAGATATTACGTATCTCTGGGCAGGAA
ATCGCTGGTGCTATCTGGCGGTTGTTATGGATCTTTTTGCCCGCAGGGTTATCGGCTGGAGTCTGTCAGCGCATGCCGAT
ACCGCACTGATAAGCAGTGCCCTGCGGATGGCCTATGAGACGCGTGGCCAACCCCGGGATGTCGTGTTCCATAGCGACCA
GGGAAGCCAGTATACAGGCCTTAAATATCAACAACTTCTCTGGCGTTGCAGAATAAATCAAAGCGTCAGTCGGCGGGGAA
ACTGCTGGGATAACAGCCCCATGGAACGCTTCTTCCGCAGTCTGAAAACAGAATGGGTGCCAACGAATGGTTACGCAGGC
AAGGACGAGGCCCGGCAGCAAATTAATGATTACATATTGAACTACTACAACAGCGTCAGACCTCACCATTATAACGGTGG
GCTGACGCCGGAAGAGTCAGAGAACAGATACCATTTTTACTGTAAAACCGTGGCCAATATTACTTGA

Protein sequence :
MKYLNLSSCQPGKHQYKNARQEHTSLPNLLERQFAVPEPDRVWCGDITYLWAGNRWCYLAVVMDLFARRVIGWSLSAHAD
TALISSALRMAYETRGQPRDVVFHSDQGSQYTGLKYQQLLWRCRINQSVSRRGNCWDNSPMERFFRSLKTEWVPTNGYAG
KDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFYCKTVANIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-95 100
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-95 100
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 9e-96 100
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 4e-91 94
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-91 94
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-91 94
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-91 94
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-64 64
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-64 64
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-64 64
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-64 64
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-64 64
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-64 64
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-64 64
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-64 64
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 7e-63 60
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 7e-63 60
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 3e-53 56
tnpB CAB61574.1 transposase B Not tested HPI Protein 5e-34 42
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 4e-34 42
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_0574 YP_003233099.1 putative IS602 transposase OrfB VFG0785 Protein 6e-92 94
ECO111_0574 YP_003233099.1 putative IS602 transposase OrfB VFG1122 Protein 1e-64 64
ECO111_0574 YP_003233099.1 putative IS602 transposase OrfB VFG1484 Protein 3e-63 60