Gene Information

Name : xylA (ECO111_4385)
Accession : YP_003236698.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Unknown
Product : D-xylose isomerase XylA
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 4393773 - 4395095 bp
Length : 1323 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGCCTATTTTGACCAGCTCGATCGCGTTCGTTATGAAGGCTCAAAATCCTCAAACCCGTTAGCATTCCGTCACTA
CAATCCCGACGAACTGATGTTGGGTAAGCGTATGGAAGAGCACTTGCGTTTTGCCGCCTGCTACTGGCACACCTTCTGCT
GGAACGGGGCGGACATGTTTGGTGTGGGGGCGTTTAATCGTCCGTGGCAGCAGCCTGGTGAGGCACTGGCGTTGGCGAAG
CGTAAAGCAGATGTCGCATTTGAGTTTTTCCACAAGTTACATGTGCCATTTTATTGCTTCCACGATGTGGATGTTTCCCC
TGAGGGCGCGTCGTTAAAAGAGTACATCAATAATTTTGCGCAAATGGTTGATGTCCTGGCAGCCAAGCAAGAAGAGAGCG
GCGTGAAGCTGCTGTGGGGAACCGCTAACTGCTTTACAAACCCTCGCTATGGCGCGGGTGCGGCGACGAACCCAGATCCT
GAAGTCTTCAGCTGGGCGGCAACGCAAGTTGTTACAGCGATGGAAGCAACCCATAAATTGGGCGGTGAAAACTATGTCCT
GTGGGGTGGTCGTGAAGGTTACGAAACGCTGTTAAATACCGACTTGCGTCAGGAGCGTGAACAACTGGGCCGCTTTATGC
AGATGGTGGTTGAGCATAAACATAAAATCGGCTTCCAGGGCACGTTGCTTATCGAACCGAAACCGCAAGAACCGACTAAA
CATCAATATGATTACGATGCCGCGACGGTCTATGGCTTCCTGAAACAGTTTGGTCTGGAAAAAGAGATTAAACTGAACAT
TGAAGCTAACCACGCGACGCTGGCAGGTCACTCTTTCCATCATGAAATAGCCACCGCCATTGCGCTTGGCCTGTTCGGTT
CTGTCGACGCCAACCGTGGCGATGCGCAACTGGGCTGGGACACCGACCAGTTCCCGAACAGTGTGGAAGAGAATGCGCTG
GTGATGTATGAAATTCTCAAAGCAGGCGGTTTCACCACCGGTGGTCTGAACTTCGATGCCAAAGTACGTCGTCAAAGTAC
TGATAAATATGATCTGTTTTACGGTCATATCGGCGCGATGGATACGATGGCAGTGGCGCTGAAAATTGCAGCGCGCATGA
TTGAAGATGGCGAGCTGGATAAACGCATCGCGCAGCGTTATTCCGGCTGGAATAGCGAATTGGGCCAGCAAATCCTGAAA
GGCCAAATGTCACTGGCAGATTTAGCCAAATATGCTCAGGAACATAATTTGTCTCCGGTGCATCAGAGTGGTCGCCAGGA
GCAACTGGAAAATCTGGTAAATCATTATCTGTTCGACAAATAA

Protein sequence :
MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELMLGKRMEEHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAK
RKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK
HQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENAL
VMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMAVALKIAARMIEDGELDKRIAQRYSGWNSELGQQILK
GQMSLADLAKYAQEHNLSPVHQSGRQEQLENLVNHYLFDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 3e-106 48
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 3e-106 48