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Name : yghJ (ECO111_3795) Accession : YP_003236130.1 Strain : Escherichia coli 11128 Genome accession: NC_013364 Putative virulence/resistance : Virulence Product : lipoprotein AcfD-like protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0810 EC number : - Position : 3771551 - 3776116 bp Length : 4566 bp Strand : - Note : - DNA sequence : ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGTGCAACCCTGTTAGCCGGTTGTGATGGCGG TGGCTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC CAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAACCTACGCCGGAACCGACACCTGATCCTGAGCCAACACCA GAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCTGCGGGTAACTGGTGATATCAC CTGTAATGATGAATCCAGCGATGGCTTTACCTTTACACCAGGCGACAAAGTCACCTGTGTGGCAGGGAACAACACGACAA TTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGTCTTGAGGACGCG CAAGAACTGGCGGGTTCCGACAACAAGAAAAGCAATGCGCTCTCGCTGGTCACCTCCATGAACAGTTGCCCGGCGAATAC AGAACAGGTGTGCCTGGAGTTCTCCTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATCGATCTGGCAC CGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACTGATAAAGCGCCATCCACTCATACTTCA CCGGTAGTCCCCGTCACGACTCCGGGAACAAAACCGGATCTGAACGCCTCCTTCGTGTCGGCTAACGCGGAACAGTTTTA TCAGTATCAACCTTCGGAAATCATTCTCTCAGAAGGTCGCCTGGTGGATAGCCAGGGATATGGTGTTGCTGGCGTCAACT ACTACACCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCTTTTAGCTGGGGCGAAACCATCTCCTTTGGT ATCGATACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCGCTGACTGAACTGGGTGATGAAGTTCGCGG GGCGAATATCGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAATACCCGTGTTGTTCCGGATGATGTACGCA AGGTCTTTGCCGAATATCCCAACGTGATTAACGAGATTATCAATCTCTCGTTATCCAACGGTGCGACGCTGGATGAAGGT GAGCAAGTTGTTAATCTGCCAAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCAAAGAGATCGATACCGCGATTTG TGCGAAAACCGACGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCGCAATGTTAATGACGGCCAGATTCAGGGCG TTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGCAAGTTCCATGTATTCCATGACTCTACTAACTTC TATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAA TGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAACGAGCTGGCGTACATTACGGAAGCGCCTT CTCTTGTTGAGCCGGAAAACGTTACGCGCGATACCGCCACTTTCAACCTGCCGTTTATTTCGCTGGGGCAAGTCGGTGAG GGCAAACTGATGGTTATCGGAAACCCACACTACAACAGCATTTTGCGTTGCCCGAACGGTTACAGCTGGAACGGGGGCGT TAATAAAGATGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGCTGCGCTATCTGT CCGATGATAAATGGACGCCGGACGCGAAAGCCAGCATGACCGTAGGCACCAACCTGGATACTGTCTATTTTAAACGTCAT GGTCAGGTTACAGGAAACAGCGCTGCGTTCGACTTCCATCCGGATTTTGCGGGCATCTCTGTTGAGCATTTAAGTAGCTA TGGCGATCTCGATCCGCAGGAAATGCCGCTGCTGATCCTTAACGGCTTTGAATATGTGACTCAGGTGGGTAACGATCCTT ATGCAATCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACTCAGCAGGATGTGACCGATCTGATCGCCTATCTGAAC AAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCGTCTGGTTTTGTGCGTCTGTT GGATGCCGCAGGTCTGTCGATGGCACTGAACAAGTCGGTAGTAAATAACGATCCGCAAGGGTATCCGAACCGCGTTCGTC AGCAGCGCGCAACGGGCATTTGGGTCTATGAACGTTATCCTGCCGTAGATGGTGCGCTGCCGTACACCATCGATAGTAAG ACAGGGGAAGTTAAGTGGAAATATCAGGTAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTGGCTGGA AGATGTAGATGGCAAACAGGAAACGCGTTATGCCTTTATTGATGAGGCCGATCATAAAACAGAGGATTCTCTGAAGGCTG CGAAGGAGAAAATTTTCGCCGCGTTCCCGGGGCTGAAAGAGTGTACTAATCCGGCATATCACTATGAGGTCAACTGCCTG GAATATCGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCACAGTATACGCAACTAAGCCTTAACGCCGA CACTGCAAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTCTACTTCCGGA CCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTGTGGAAC GATACGAGCTATCGTTATGAAGAAGGCAAAAATGACGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTGCTACGC CAATGATGCCTATGCAGGCGGCACCAAGTGTTCTGCAGATCTGAAAAAATCGCTGGTCGATAACAACATGATCTACGGTG ACGGTAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGCCTGATGCTG GGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTCGAGAAGTATCCGGGAGCAGTATCGGAAGAGGGACAGAACGT TACTGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGTGGGCACCGG CTCAGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGTGGCGCTGGCTGACGACCTGACCGGA CGTGAGAAGCATGAAGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACGTACTCTCTGGACGCTAGCGGTACGGTGAA GTTCAAGGTGCCTTACGGTGGCCTGATTTATATCAAGGGCAATAGCTCTACCAATGAATCTGCCAGCTTCACCTTTACTG GCGTGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTCACCGGCTCCGCTGGGTGAGCTGGAA TCAGACGCTTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACTGGAGCAATTCGCTAA CGATCTGGACACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTGATGAAACGAGCGGTAAGCACCGGATGTTTACCT ATAAAGCATTGACGGGACATAAACATCGTTTCACAAACGATGTGCAGATCTCCATCGGTGATGCGCACTCGGGTTATCCG GTAATGAACAGCAGCTTCTCGACGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCACGAAGT AGGGCACAACGCCGCAGAAACGCCGCTGACTGTTCCAGGCGCGACCGAAGTGGCGAACAACGTGCTGGCGCTGTACATGC AGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAGAGCAACGGT CAGGCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCGCAGCTGAAGGAATGGGCAGAGAAAAACTTTGA TATCAAGAAATGGTATCCAGAAGGTGAATTGCCGAAGTTCTTCAGCGATCGTGAAGGGATGAAAGGCTGGAACCTGTTCC AGTTGATGCACCGTAAAGCGCGCGGCGATGACGTTGGTGACAAGACCTTTGGTGGCAAGAATTACTGTGCTGAATCCAAC GGTAACGCTGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAA TCCGGGTGCGAATGCTTACCAGCTGCCGGGGGCGAGCGAGATGAGCTTCGAGGGCGGTGTGAGCCAGTCGGCGTACAACA CGCTGGCGTCACTCAAGCTGCCGAAACCGGAACAGGGACCGGAAACCATTAACAAGGTTACCGAGCATAAGATGTCTGTC GAGTAA Protein sequence : MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPTPDPEPTP EPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDA QELAGSDNKKSNALSLVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS PVVPVTTPGTKPDLNASFVSANAEQFYQYQPSEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFG IDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEG EQVVNLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLGQVGE GKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSDDKWTPDAKASMTVGTNLDTVYFKRH GQVTGNSAAFDFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLN KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGIWVYERYPAVDGALPYTIDSK TGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFIDEADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCL EYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWN DTSYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLML GRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTG REKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELE SDAFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDETSGKHRMFTYKALTGHKHRFTNDVQISIGDAHSGYP VMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNG QAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPEGELPKFFSDREGMKGWNLFQLMHRKARGDDVGDKTFGGKNYCAESN GNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLPKPEQGPETINKVTEHKMSV E |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 92 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 50 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 50 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 50 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_003236130.1 | lipoprotein AcfD-like protein | VFG0106 | Protein | 0.0 | 50 |
