|
Name : ECO111_3789 (ECO111_3789) Accession : YP_003236124.1 Strain : Escherichia coli 11128 Genome accession: NC_013364 Putative virulence/resistance : Virulence Product : putative type II secretion protein GspF Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3764335 - 3765558 bp Length : 1224 bp Strand : - Note : - DNA sequence : ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGTATGATTGAGGCGGATTCCGCGCGTCA TGCCCGCCAGTTGTTGCGCGGTAAAGAGCTTATCCCCGTGCATATTGAAGCCCGGATGAATACTTCGTCAGGGGGGATGT TGCAGCGTCGGCGGCACGCACATCGTCGCGTGGCGGCGGCAGATCTTGCGCTGTTCACGCGCCAACTGGCAACGCTGGTA CAGGCAGCAATGCCGCTGGAAACCTGCTTACAGGCGGTCAGTGAGCAAAGTGAAAAACTGCATGTAAAAAGCCTCGGAAT GGCGCTGCGCAGCCGGATTCAGGAAGGTTACACCCTGTCGGACAGCCTGCGCGAACATCCCCGCGTCTTTGATTCTCTGT TTTGTTCGATGGTTGCTGCCGGAGAAAAATCCGGGCATCTCGACGTGGTGCTTAATCGCCTGGCAGATTACACCGAACAG CGACAGCGCCTGAAATCACGTCTATTGCAGGCCATGCTCTATCCGCTGGTTCTGCTGGTGGTGGCAACGGGCGTAGTCAC TATTTTGCTGACGGCAGTGGTGCCGAAAATCATCGAACAGTTTGATCATCTCGGACACGCGCTACCCGCCTCAACCCGCA CGCTTATTGCCATGAGCGACGCGTTACAGGCCAGCGGCGTTTACTGGCTGGCGGGATTGCTGGCGCTTCTGGTGCTGGGG CAACGGCTACTTAAAAATCCTACTATGCGCCTGCGCTGGGATAAAACCGTGCTGCGTCTGCCCGTGACAGGGCGTGTTGC GCGCGGGCTGAATACGGCGCGTTTTTCCCGCACCTTAAGCATCCTCACCGCCAGCAGTGTTCCGCTACTGGAAGGTATTC AGACCGCTGCCGCTGTGTCGGCAAATCGCTATGTCGAACAACAACTACTGCTGGCGGCAGATCGCGTCCGCGAAGGAAGC AGTCTGCGCGCCGCGCTGGCGGAGTTGCGCCTGTTCCCCCCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG CGAACTGGAAACCATGCTTGAGCAGGCCGCTGTTAATCAGGAACGGGAATTTGATACCCAGGTGGGGCTGGCGTTGGGGC TGTTTGAGCCTGCGCTGGTGGTGATGATGGCGGGCGTGGTGCTGTTTATTGTCATCGCCATCCTCGAGCCGATGCTGCAA CTGAATAATATGGTTGGAATGTAA Protein sequence : MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEARMNTSSGGMLQRRRHAHRRVAAADLALFTRQLATLV QAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ RQRLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHALPASTRTLIAMSDALQASGVYWLAGLLALLVLG QRLLKNPTMRLRWDKTVLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS SLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQ LNNMVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-154 | 98 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-153 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO111_3789 | YP_003236124.1 | putative type II secretion protein GspF | VFG2049 | Protein | 3e-148 | 98 |
| ECO111_3789 | YP_003236124.1 | putative type II secretion protein GspF | VFG0181 | Protein | 3e-68 | 46 |
