Gene Information

Name : ECO111_3787 (ECO111_3787)
Accession : YP_003236122.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : putative type II secretion protein GspH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3763296 - 3763826 bp
Length : 531 bp
Strand : -
Note : -

DNA sequence :
ATGCTGGTGATTTTTCTTATCGGCCTTGCCAGTGCGGGCGTGGTACAGACTTTTGCGACCGATTCTGAATCGCCCGCGAA
AAAAGCGGCACAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACAGGGCAGTGATTGAAGGGCAGACACTCGGTGTGC
TAATCGACGCGCCTGGCTATCAGTTTATGCAGCGTCGTCAGGGGCAGTGGTTGCCCGTTTCCGCGACCCGGTTATCGGCA
CAGGTTACGGTGCCAAAACAGGTGCAGATGCTGTTACAACCCGGAAGTGATATCTGGCAGAAGGAGTATGCGCTGGAGCT
GCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAAAAGAGGCGAAAAAGAAGACGCCGCAGATCCGTT
TTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCGGCGGCGCAAAACGCATGTTGGGCGGTAAAACTG
GCGCACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCCATGA

Protein sequence :
MLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDAPGYQFMQRRQGQWLPVSATRLSA
QVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNACWAVKL
AHDGALSLNQCDERMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspH CAE85230.1 GspH, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-79 99
gspH YP_854403.1 type II secretion protein GspH Not tested PAI I APEC-O1 Protein 1e-78 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_3787 YP_003236122.1 putative type II secretion protein GspH VFG2051 Protein 1e-78 97