|
Name : ECO111_3782 (ECO111_3782) Accession : YP_003236117.1 Strain : Escherichia coli 11128 Genome accession: NC_013364 Putative virulence/resistance : Virulence Product : putative type II secretion protein GspM Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3149 EC number : - Position : 3759639 - 3760175 bp Length : 537 bp Strand : - Note : - DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACA ACACCTGGCGGGGCGTTCTCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACG TCCTCATCTGGCAGCCGTTGAGCGAACGGATAGAACAACAGGAGACAATGTTGCAGCAACTGGTGGCGATGAACACCAGA CTGAGGAGCGCCGCGCCGGATATTATGGCGGCGCGAAAATCCGCCACAACAACGCCTGCGCAGGTATCGCGGGTTATCAG TGACAGCGCTTCCGCGCACTCGGTAGTCATCAAGCGGATAGCCGAGCGTGGGGAGAATATTCAGGTCTGGATAGATCCGG TGGTGTTAAATGACCTGCTGAACTGGTTAAACGCGCTGGATGAAAAGTATGCGCTGCGGGTGACACAAATTGATGCCAGT GCTGCTGAGAAGACTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAA Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR LRSAAPDIMAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVLNDLLNWLNALDEKYALRVTQIDAS AAEKTGMVNVQRLEFGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 9e-71 | 97 |
| gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-69 | 95 |
| gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 2e-69 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO111_3782 | YP_003236117.1 | putative type II secretion protein GspM | VFG2056 | Protein | 1e-47 | 92 |
