Gene Information

Name : ECO111_3773 (ECO111_3773)
Accession : YP_003236109.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Unknown
Product : putative IS2 transposase InsAB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3752420 - 3753244 bp
Length : 825 bp
Strand : -
Note : Integrative element ECO111_IE05

DNA sequence :
TTGCACATCATTCTCAGACGAAGTGATGACTGGAAGGATGGCCGCCGCAGTCTTCACACTGATGATACGGATGTGCTTCT
CCGGATACATCATATCATCGGAGAGTTGCCCACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAAC
TTGATGGTATGTCTGCGATCAATGCCAAACAAGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCC
GCTGTACCGCCATCGAAACAGGCACATACCGGCAGAGTGGCCGTGAAAGAAAGTAATCAGCGATGGTGCTCTGACGGGGT
CGAGTTCCGCTGTGATAACGGAGAGAGACTGCGTGTCACATTCGCGCTGGACTGCTGTGACCGTGAGGCACTGCACTGGG
CAGTCACTACGGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGAG
CTTCCGGCGTCTCCAGTAGAGTGGCTGACGGATAATGGTTCATGCTACCGGCCTAATGAAACACGGCAGTTTGCCCGGAT
GTTGGGGCTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAA
AGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCATTCGAGCATTAT
AACGAAAGGCATCCGCATAGTGCACTGGGTTATCGCTCGCCACGGGAATATCTACGGCAGCAAGCCAGTAATGGGTTAAG
TGATAACAGGTGTCTGGAAATATAG

Protein sequence :
MHIILRRSDDWKDGRRSLHTDDTDVLLRIHHIIGELPTYGYRRVWALLRRQAELDGMSAINAKQVYRIMRQNALLLERKP
AVPPSKQAHTGRVAVKESNQRWCSDGVEFRCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNE
LPASPVEWLTDNGSCYRPNETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISVMPKPDGLTAAKNLAEAFEHY
NERHPHSALGYRSPREYLRQQASNGLSDNRCLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 9e-128 100
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 7e-117 96
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 5e-114 94
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 9e-115 94
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 2e-113 94
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 3e-120 94
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 3e-120 94
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 3e-120 94
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 1e-120 94
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-119 93
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 1e-119 93
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 5e-106 80
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 5e-76 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB VFG0649 Protein 1e-113 94
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB VFG0608 Protein 1e-120 94
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB VFG0621 Protein 1e-120 94
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB VFG1732 Protein 6e-120 93