Gene Information

Name : ECO111_3768 (ECO111_3768)
Accession : YP_003236104.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : T3SS component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3749397 - 3750092 bp
Length : 696 bp
Strand : -
Note : Integrative element ECO111_IE05

DNA sequence : 
ATGATTTATTTCTTAACAGACTTAATAAAATTTTATTGCCTTATGAAACTTTATGAATTTAAAAATATAAAAATTGATTT
AGTGCTTACAGAAGATATCATACCAGAGGATAAGTTACAGGAAATTATTCAATCTGATGATATTATCAAACTGGCTCGAA
AAAAAACATATGAACATTTACTGAGGGCGAGGAGGAAATCGAAAGAATTAAAGACAGAATCCAGAAAAAAAATTGCCAGA
AAAATGATTGTAATGAGAGAAAGGATTCGAAAAAATAATAAAATAAAATTAGATAAAGAGGTTAACCAATCGATAAAATG
GGTTAAAGATATCCAGGCTATCGAGTTGGTCTTAATGCAGGACATAATGAATAAGGTTCATTTGTCACTGACTAATGCAT
TACATTCTTTAGATACATCATCAAGAATTAATTGGGATGATTTACTTAATGAAGTTGTAAGGGAAACTCTATCTAATAAC
AATATTGTCGGAGCTATTAAGATCACTAAAAACCCAGACATTAAACTTGATCCTGGCGAGGCCAACAATATACAGCTTAT
TAATGATGCAAACACACCGCATAATAAAATTATAATAGAAAATGAATATATTAGAATAACTTTAGACCCATTAGAGCAAA
TAAGTATTTTATTGAATTCATTTAAAGATAATTATCTTAGCATTATTCAGGAATGA

Protein sequence : 
MIYFLTDLIKFYCLMKLYEFKNIKIDLVLTEDIIPEDKLQEIIQSDDIIKLARKKTYEHLLRARRKSKELKTESRKKIAR
KMIVMRERIRKNNKIKLDKEVNQSIKWVKDIQAIELVLMQDIMNKVHLSLTNALHSLDTSSRINWDDLLNEVVRETLSNN
NIVGAIKITKNPDIKLDPGEANNIQLINDANTPHNKIIIENEYIRITLDPLEQISILLNSFKDNYLSIIQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3768 YP_003236104.1 T3SS component Virulence LEE Protein 4e-102 100
unnamed ACU09474.1 conserved hypothetical protein Not tested LEE Protein 3e-93 99
Z5136 NP_290284.1 hypothetical protein Not tested LEE Protein 1e-86 99
ECs4584 NP_312611.1 hypothetical protein Not tested LEE Protein 2e-101 99
unnamed AAC38368.1 Orf5 Not tested LEE Protein 7e-101 99
unnamed AAC31529.1 L0050 Not tested LEE Protein 1e-101 99
unnamed AAK26699.1 unknown Not tested LEE Protein 1e-94 92
ECO103_3634 YP_003223491.1 T3SS component Virulence LEE Protein 4e-94 92
unnamed AAL57526.1 unknown Not tested LEE Protein 1e-94 92
ECO26_5255 YP_003232137.1 T3SS component Virulence LEE Protein 3e-94 92
unnamed AAL57587.1 unknown Not tested LEE Protein 1e-94 92
st08 CAC81846.1 ST08 protein Not tested LEE II Protein 1e-94 92
unnamed CAI43890.1 hypothetical protein Not tested LEE Protein 1e-94 92
unnamed AAL06353.1 unknown Not tested LEE Protein 4e-84 76
escL AFO66316.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 1e-44 45
escL AFO66399.1 putative LEE-encoded putative type III secretion system factor Not tested SESS LEE Protein 8e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_3768 YP_003236104.1 T3SS component VFG0714 Protein 4e-101 99
ECO111_3768 YP_003236104.1 T3SS component VFG0828 Protein 6e-87 99