Gene Information

Name : espH (ECO111_3748)
Accession : YP_003236084.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : T3SS secreted effector EspH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3734895 - 3735404 bp
Length : 510 bp
Strand : -
Note : Integrative element ECO111_IE05

DNA sequence :
ATGTCGTCATCATTATCAGGTATAACATTCGCGACTTCTTTGACAAGCAATCAAGCGTCATGGAGTAAGTTGACCCGAAC
TCTTCATATATCGAATGATGATACAGTAGATGAACTGCAACTTAAAGCACGCATGCAGCAGCGTCACCACCGGGTTTTTC
CAGACATTGATGACTATTCAGTTATCAATTTTCGGGGAAAAGAGTATGCTGTCCGCTTCATTAAAGAGAATGATAATTAT
GTATACAAAGTACATAAGATAACTCAGGAAAGTGGATGTTTCTCAAAGATATTTAGCTTTTTGTATGGAGGCGTTACGAA
GGCCCTGGAAAGTAAATTAAATGAGAGACACATTACGCCACTTTCTTCAACCTGGTTTCCTCGCACTGCACTGGAAGGCT
TTTTAACTGAAAGAGGGCTTTCTTCTTTGTTACGTCGCGTACAGTCTACAGAAGGTGTGAACCCTCCAGAGAATACTACA
TTCAACTCTTTATCAGGCGTGATGGGTTAA

Protein sequence :
MSSSLSGITFATSLTSNQASWSKLTRTLHISNDDTVDELQLKARMQQRHHRVFPDIDDYSVINFRGKEYAVRFIKENDNY
VYKVHKITQESGCFSKIFSFLYGGVTKALESKLNERHITPLSSTWFPRTALEGFLTERGLSSLLRRVQSTEGVNPPENTT
FNSLSGVMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espH YP_003236084.1 T3SS secreted effector EspH Virulence LEE Protein 1e-75 100
unnamed AAC38387.1 Orf18 Not tested LEE Protein 1e-69 92
unnamed AAL06373.1 unknown Not tested LEE Protein 8e-62 76
st28 CAC81866.1 ST28 protein Not tested LEE II Protein 1e-55 75
espH YP_003223471.1 T3SS effector EspH Virulence LEE Protein 2e-54 75
espH YP_003232157.1 T3SS effector EspH Virulence LEE Protein 1e-55 75
unnamed CAI43870.1 hypothetical protein Not tested LEE Protein 1e-54 75
unnamed AAK26719.1 unknown Not tested LEE Protein 1e-55 75
unnamed AAL57546.1 unknown Not tested LEE Protein 1e-55 75
unnamed AAC31509.1 L0030 Not tested LEE Protein 1e-51 68
unnamed ACU09454.1 hypothetical protein Not tested LEE Protein 1e-51 68
Z5115 NP_290264.1 hypothetical protein Not tested LEE Protein 2e-51 68
ECs4564 NP_312591.1 hypothetical protein Not tested LEE Protein 2e-51 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espH YP_003236084.1 T3SS secreted effector EspH VFG0734 Protein 5e-70 92
espH YP_003236084.1 T3SS secreted effector EspH VFG0808 Protein 6e-52 68