Gene Information

Name : espA (ECO111_3740)
Accession : YP_003236076.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : translocon EspA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3724687 - 3725265 bp
Length : 579 bp
Strand : -
Note : Integrative element ECO111_IE05

DNA sequence :
ATGGATACATTAAATACAGCATCAGTTGCTAGTACGAATGCGAGTACTTCGACATCGCTGACCTATGATTTAGGGAGCAT
GTCGAAAGATCAGGTTGTTGAACTATTCAATAAACTCGGTGTTTTTCAGGCTGCGCTTCTCATGTTTTCCTATATGTATC
AGGCACAAAGCGATCTGTCGATTGCAAAGTTTGCTGATATGAATGAGGCATCTAAGGCGTCAACCACTGCCCAAAAAATG
GCGAATCTTGTGGATGCTAAAATTGCTGAGGTTCAGAGTAGCTCCGACAAGAATGCGAAGGCTCAACTTCCTAAAGAAGT
GCTTGACTATATAAATGATCCTCGCAATGACGTTACAATAAGTGGTATTACCGATCTAAATGCTGCATTAGGCGCTGGTG
ATTTGCAAACGGTGAAAGCAGCTATTTCAGCTCAAGCGAATAATTTGACAACGACGGTGAATAATAGCCAGCTTGAAATA
CAGCAAATGTCAAATACGTTAAACCTATTAACGAGTGCACGTTCTGATATGCAGTCACTGCAATTCAGAACTATATCATC
AATATCCCTTGGTAAATAA

Protein sequence :
MDTLNTASVASTNASTSTSLTYDLGSMSKDQVVELFNKLGVFQAALLMFSYMYQAQSDLSIAKFADMNEASKASTTAQKM
ANLVDAKIAEVQSSSDKNAKAQLPKEVLDYINDPRNDVTISGITDLNAALGAGDLQTVKAAISAQANNLTTTVNNSQLEI
QQMSNTLNLLTSARSDMQSLQFRTISSISLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espA YP_003236076.1 translocon EspA Virulence LEE Protein 4e-73 100
espA AAC38394.1 EspA Virulence LEE Protein 2e-68 90
espA YP_003232165.1 translocator EspA Virulence LEE Protein 7e-68 89
espA AAK26727.1 EspA Virulence LEE Protein 5e-68 89
espA AAL57554.1 EspA Virulence LEE Protein 5e-68 89
espA CAC81874.1 EspA protein Virulence LEE II Protein 5e-68 89
espA NP_290256.1 hypothetical protein Virulence LEE Protein 5e-65 85
espA AAC31501.1 L0022 Virulence LEE Protein 3e-65 85
ECs4556 NP_312583.1 protein EspA Virulence LEE Protein 5e-65 85
espA ACU09446.1 secreted protein EspA Virulence LEE Protein 3e-65 85
espA CAI43862.1 EspA protein Virulence LEE Protein 4e-65 84
espA YP_003223463.1 translocon EspA Virulence LEE Protein 6e-65 84
espA AAO66617.1 EspA beta variant Virulence LEE Protein 9e-65 83
unnamed AAL06381.1 EspA Virulence LEE Protein 3e-64 80
espA AFO66319.1 putative secreted protein EspA Not tested SESS LEE Protein 1e-60 78
espA AFO66389.1 putative secreted protein EspA Virulence SESS LEE Protein 1e-60 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espA YP_003236076.1 translocon EspA VFG0742 Protein 7e-69 90
espA YP_003236076.1 translocon EspA VFG0800 Protein 1e-65 85