Gene Information

Name : espB (ECO111_3738)
Accession : YP_003236074.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : translocon EspB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3722549 - 3723511 bp
Length : 963 bp
Strand : -
Note : Integrative element ECO111_IE05

DNA sequence : 
ATGAATACTATCGATAATAACAATGCGGCAATCGCAGTTAATTCTGTTTTGAGCAGCACGACTGGCAGCGCCAGTTCAAC
AACGACATCAACCTCGTCAATCAGTTCATCTTTACTTACTGATGGCAGAGTGGATATTTCTAGGCTTCTGCTGGAGATTC
AAAAACTGTTGCGTGAGATGGTCACCACATTGCAAGATTATCTTCAGAAGCAATTGGCGCAAAGCTATGACATCCAACTA
GCCGTTTTTGAGAGCCAAAATAAAGCTATTAGTGAGAAAAAAGCCGGTGCGACAGCTGCTCTGATTGGTGGTGCTATCTC
ATCTGTCCTGGGGATTTTAGGCTCTTTTGCTGCCATTAATAGCGCAACGAAAGGAGCGAGTGATGCCGTTCAGCAAGCCG
CTTCTACTTCTGCGAAGTCTATCAGTACAGCCTCTGAAGCTTCAACTAAAGCACTGGCGAAGGCTTCCGAAAGTATTGCA
GATGCAGCAGATGATGCAGCCTCAGTGCAGCAAACTATCGCGGCAGCTGCAAAAGCGGCCAGTCGTACATCTGGTGTCAC
TGATGATGTGGCTGCTTCTGCTCAGAAAGCTTCTCAAGTAGCTGAAGAGGCTGCTGGTGCTGCTCAAGAATTAGCAGAGA
AGGCAGGATTATTAAGTCGCTTTACTGCTGCTGCTGGAAGGATTTCCGGTTCTACGTCATTTATTGTTGTTACCAGCCTT
GCTGAAGGTACGAAAACATTGCCAACAACGATATCTGAATCTGTCAAGTCCAATCATGATATCAGTGAGCAGCGTGCTAA
ATCTGTAGAAAATCTCCAGGCGTCGAATTTAGAGAACTACAAACAGGATGTTCGCAGAACGCAGGATGATATCTCTAGCC
GTCTGCGTGATATGACAACGACAGCCCGTGACCTTACCGACCTTATTAATCGCCTGGGGCAATCGGCTCGCTTAGCTGGG
TAA

Protein sequence : 
MNTIDNNNAAIAVNSVLSSTTGSASSTTTSTSSISSSLLTDGRVDISRLLLEIQKLLREMVTTLQDYLQKQLAQSYDIQL
AVFESQNKAISEKKAGATAALIGGAISSVLGILGSFAAINSATKGASDAVQQAASTSAKSISTASEASTKALAKASESIA
DAADDAASVQQTIAAAAKAASRTSGVTDDVAASAQKASQVAEEAAGAAQELAEKAGLLSRFTAAAGRISGSTSFIVVTSL
AEGTKTLPTTISESVKSNHDISEQRAKSVENLQASNLENYKQDVRRTQDDISSRLRDMTTTARDLTDLINRLGQSARLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espB YP_003236074.1 translocon EspB Virulence LEE Protein 4e-77 100
espB AAC38396.1 EspB Virulence LEE Protein 2e-72 89
unnamed AAL06383.1 EspB Virulence LEE Protein 1e-69 84
espB AAK26729.1 EspB Virulence LEE Protein 4e-48 72
espB AAL57556.1 EspB Virulence LEE Protein 4e-48 72
espB YP_003232167.1 translocator EspB Virulence LEE Protein 5e-48 72
espB YP_003223461.1 translocon EspB Virulence LEE Protein 2e-48 72
espB CAI43860.1 EspB protein Virulence LEE Protein 7e-48 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espB YP_003236074.1 translocon EspB VFG0744 Protein 9e-73 89