Gene Information

Name : ECO111_3596 (ECO111_3596)
Accession : YP_003235940.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : type III secretion protein EpaR
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 3574587 - 3575354 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGGGGGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCGGTTTTTGCCGATTGGCACCAACTTT
CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTTCGTCACCCAATAATAATAGTGGTATCATGTGCAT
TAGTTCAGCATTACCACTATGAATTATTGAACTTAAATGAAATCGATATTGCTTTGTTCGCTGCCAGAGAAATTATCATA
GGGCTGTTTATTGCATGCTTATTAGCATCCCCGTTTTGGATTTTCCTTGCTATAGGTAGCTTTATCGATAACCAACGCGG
TGCAACATTAAGTAGTACTTTGGATCCGGCTACAGGTGTCGATACCTCGGAATTAGCAAGATTATTTAACCTTTTCTCTG
CTGCGGTTTATCTTACTAAAGGTGGAATGAACTTTATTCTGGAAACTCTTTGGCAAAGTTATAATTTATGGCCTTCAGGC
AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAACATAATGACTCATACTATCGTTTACGCAAGCCC
CGTGATTGCCGTTATGCTGGGCGGTGAGGCTGTCCTGGGATTGCTGGCACGTTATGCTTCACAACTAAATGCTTTTGCCA
TTTCACTGACTGTCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGCCCCAATACTGGCTGAACGAGTAATG
CCGTTATCCTTTTTCCCAGAACAATTGCAACTATACATTGAGAAATAG

Protein sequence :
MGEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALVQHYHYELLNLNEIDIALFAAREIII
GLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTKGGMNFILETLWQSYNLWPSG
NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFAPILAERVM
PLSFFPEQLQLYIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epaR AAZ31291.1 EpaR Virulence ETT2 Protein 1e-81 97
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 5e-40 46
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 5e-40 46
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 2e-40 46
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 7e-39 45
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 3e-30 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_3596 YP_003235940.1 type III secretion protein EpaR VFG0549 Protein 1e-40 46
ECO111_3596 YP_003235940.1 type III secretion protein EpaR VFG1014 Protein 8e-36 43