Gene Information

Name : ECO111_0313 (ECO111_0313)
Accession : YP_003232851.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 334762 - 335640 bp
Length : 879 bp
Strand : -
Note : Integrative element ECO111_IE01

DNA sequence :
ATGTTCCTCCGGGGACATGGCCTTTTTGCTTTTATTTCATTATCAGATAAGGAGTTAATTATGCGATTAGCCAGTCGCTT
CGGACGGATTAATCAGATACGCCGTGACCGCCCACTGACCCATGAAGAACTGATGCACTATGTTCCCAGCATTTTTGGGG
AAGACCGGCATACCTCCCGCAGTGAACGGTATTCGTACATCCCCACCATCACAGTGCTGGAAAGCCTGCAGCGGGAAGGC
TTTCAGCCATTCTTCGCCTGCCAGACCCGCGTACGTGACCCGGGCCGCCGGGGGTATACCAAACACATGCTGCGTCTGCG
CCGTGACGGGGAGATAAACGGACAACATGTCCCTGAAATTATTCTGCTCAACTCCCATGACGGTACCTCCAGCTACCAGA
TGCTGCCGGGTTACTTCAGATTCGTCTGCCAGAACGGCTGCGTCTGTGGTCAGTCTCTGGGGGAAGTGCGTGTTCCGCAC
CGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGTGTGTTTGACCGGATAGAGGAGAAGCGTGA
TGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACTGACTTACCGTTATGGTGACG
AACATCAGCCCGTCACCACCGCCGACATTCTGACACCACGACGCAGGGAGGATTACGGTAAGGACCTGTGGAGTGCTTAT
CAGACCATCCAGGAGAATATGCTGAAAGGCGGGCTTTCCGGTCGCAGTGCAAAAGGAAAACGTATCCACACCCGTGCCAT
TCACAGCATCGATACCGACATTAAGCTCAACCGGGCATTGTGGGTGATGGCAGAAACGCTGCTGGAGAGCATGCGCTGA

Protein sequence :
MFLRGHGLFAFISLSDKELIMRLASRFGRINQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYSYIPTITVLESLQREG
FQPFFACQTRVRDPGRRGYTKHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPH
RGNVVDRVIEGAYEVVGVFDRIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAY
QTIQENMLKGGLSGRSAKGKRIHTRAIHSIDTDIKLNRALWVMAETLLESMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 7e-115 96
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 1e-116 96
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-116 96
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-116 96
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-116 96
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-115 95
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-115 95
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 9e-115 94
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 9e-115 94
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-115 94
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 4e-111 92
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-110 92
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-110 92
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-110 91
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-109 91
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-73 56
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-72 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_0313 YP_003232851.1 hypothetical protein VFG1676 Protein 4e-115 96
ECO111_0313 YP_003232851.1 hypothetical protein VFG0658 Protein 4e-115 94
ECO111_0313 YP_003232851.1 hypothetical protein VFG1526 Protein 2e-111 92
ECO111_0313 YP_003232851.1 hypothetical protein VFG1615 Protein 9e-110 91