Gene Information

Name : ECO111_3084 (ECO111_3084)
Accession : YP_003235460.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : putative chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3028388 - 3029140 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAATCTGACTAACACTGCAAAAATCGTTGTCCCGGCACTGGCGCTGCTGGCGACAGCGGTCAGTTTCTCCAGCCA
CGCTTCGGTGACGCCCGACAGGACACGGCTGGTGTTTAACGAAAGCGACAAGTCCATCAGCGTCACGCTGCGCAACAACG
ATCCCACACTGCCTTATCTGGCGCAGAGCTGGATAGAGGATGCAAAGGGCAACAAAATCAGCTCGCCGCTTGCGGTGCTT
CCGCCAGTGCAGCGCATCGATGCGATGATGAACGGCCAGGTGAAGGTGCAGGGGCTGCCGGATATCAACAAACTGCCGGC
CGACCGCGAGAGCGTGTTCTATTTCAACGTGCGCGAAATTCCGCCGAAATCAAATAAACCGAACACACTGCAGATTGCGC
TGCAGACGCGTATCAAACTGTTCTGGCGACCGAAGGCGCTGGAGAACACCAGCATGAAAAGTCCGTGGCAGCATAAGGTG
ACGCTCATCCGTAACGGCCAGGACTTCACCGTCAATAACCCGACGCCGTACTACGTGATCATCAGCAACGCCAGCGCTAA
AAAAGGCGGCAACCCGCCGGCGGGATTCACACCGCTGATGATGGAGCCGAAAACCTCCGCACCGCTGAATGCGAAGATGG
ACAGCGTGCCGGTGCTGACTTACATCAACGACTACGGCGCGCGGATGCCGCTGTACTTTATATGCACCGGCAACAGCTGC
CAGGTGGATGAAGAGCAGAGCCGCAAAGGCTGA

Protein sequence :
MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVL
PPVQRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV
TLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPVLTYINDYGARMPLYFICTGNSC
QVDEEQSRKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-49 44
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 6e-49 44
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 8e-49 44
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 8e-49 44
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 8e-49 44
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 6e-49 44
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-43 43
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 5e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_3084 YP_003235460.1 putative chaperone VFG1547 Protein 1e-49 44
ECO111_3084 YP_003235460.1 putative chaperone VFG0896 Protein 4e-49 44
ECO111_3084 YP_003235460.1 putative chaperone VFG0885 Protein 9e-44 43