Gene Information

Name : lafK (ECO111_0259)
Accession : YP_003232799.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : putative lateral flagellar RpoN-interacting regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3829
EC number : -
Position : 287816 - 288802 bp
Length : 987 bp
Strand : +
Note : FhlA-like

DNA sequence :
ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCATTTAACGTGCC
GGTGCTCATTCAGGGCGAAACCGGCGCGGGCAAAGAGTGCGTGGCGAAATATATTCACACAGTCGCCTTTGGTGAAAATG
AAAACGCGCCCTATATCGGCGTGAACTGCGCTGCGATCCCGGAAAACATGCTGGAAGCAACCTTATTTGGCTACGACAAA
GGCGCATTTACCGGCGCAATTGCCAGTGTGCCAGGAAAAATGGAACTGGCGAATAACGGCACCTTATTACTCGATGAAAT
TGGCGATATGCCGCTGGCGTTACAGGCCAAAATATTACGCGTATTGCAGGAACAACAGGTTGAGCGATTAGGCAGCAACC
GACAAATTAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAACCTTGAGCAGGAAGTCGCCGCCGGGCGTTTTCGT
GAAGATCTCTATTATCGTCTGGCGGTTATTCCTATTACCATGCCGCCGCTGCGTGAACGTCTGAACGATATTATTCCGCT
GGCAGAGTCATTTATAAAAAAATACTCCACGGTGCTGGTGAAAAATATCACCCTTTCAGAATCTACCCGCCGTGCGATGC
TGAATTACCGCTGGCCCGGCAATGTGCGCCAGCTGGAGAACGCCATTCAGCGGGGAATGATTTTAAATCGCGACGGCGTG
ATTTACCCGGACGCCTTAGGCCTGCCGGAAAATGACATTGCCGACCACAGCGAACTGCAATGGCCTGCTCAGCCCGCCGT
ACACATTGCCGAAACCAGCGATTTAGGCCAGCACGGACGAAGCGCCCAGTATCAATATATCGCTGACCTGATGCGTAAAT
ATCAGGGCAACCGCAGCAAAATCGCCGACCTGTTAGGTATTACCCCGCGCGCACTGCGCTATCGACTGGCCTCCATGCGC
AAGCACGGTATCGAAGTTTTCTCCTGA

Protein sequence :
MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENENAPYIGVNCAAIPENMLEATLFGYDK
GAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFR
EDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRAMLNYRWPGNVRQLENAIQRGMILNRDGV
IYPDALGLPENDIADHSELQWPAQPAVHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMR
KHGIEVFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAD24684.1 sigma-54-dependent enhancer-binding protein HrpS Virulence Hrp PAI Protein 5e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lafK YP_003232799.1 putative lateral flagellar RpoN-interacting regulatory protein VFG1249 Protein 4e-71 48