Gene Information

Name : ECO111_2593 (ECO111_2593)
Accession : YP_003235004.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2567034 - 2568647 bp
Length : 1614 bp
Strand : +
Note : Prophage ECO111_P12; predicted protein Orf3 in insertion sequence IS682

DNA sequence :
ATGAGTCAGAAATACCTCATTCGCATCGCAGAGCTGGAAAGGTTGCTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA
CCAGCAACTGAGTCTGGTTGAAGAGACGGAAGCCTTCCTGCGCTCTGCACTGACACGTGCCGAAGAAAAGATCGAAGAAG
ATGAACGGGAAATAGAACATCTGCGGGCTCAGATAGAAAAACTGCGCCGGATGCTGTTCGGTACCCGTTCTGAAAAACTG
CGTCGTGAAGTTGAACTGGCTGAGGCTCTGCTGAAACAACGTGAACAGGACAGCGATCGTTACAGTGGGCGGGAAGACGA
TCCTCAGGTTCCCCGCCAGTTGCGACAGTCGCGCCATCGTCGTCCGTTACCGGCACACCTTCCCCGTGAAATACACCGCC
TGGAGCCAGAAGAAAGCTGTTGCCCGGAGTGTGGCGGTGAGCTGGATTATCTGGGAGAAGTCAGCGCTGAACAGCTGGAA
CTGGTGAGCAGTGCCCTGAAAGTGATCCGCACAGAACGGGTAAAAAAAGCCTGTACAAAATGTGACTGTATTGTTGAAGC
ACCGGCGCCGTCCCGCCCGATAGAGCGTGGTATCGCGGGCCCCGGATTACTTGCCCGCGTGTTAACGGGAAAATACTGCG
AACATCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGCCAGGGTGTCGAACTGAGCCGGGCCTTACTCTCCAACTGG
GTTGACGCGTGCTGCCAGTTAATGACACCGGTGAATGATGCCCTGTACCGTTATGTGATGAATACCCGCAAGCTTCACAC
TGACGACACACCGGTAAAGGTACTGGCACCGGGCCTGAAAAAGACGAAAACAGGGCGCATCTGGACGTATGTCCGGGATG
ATCGCAATGCGGGTTCGTCATCTCCTCCGGCGGTCTGGTTCGCGTACTCATCGAACCGGCAGGGGAAACACCCGGAGCAA
CACCTCCGCCCCTTCCGGGGTATCCTGCAGGCGGATGCGTTCACAGGTTATGACAGGCTGTTCAGTGCAGAACGTGAAGG
TAGTGCGCTGACAGAAGTTGCGTGCTGGGCTCATGCCCGGAGAAAAATCCACGATGTATACATCAGCAGCAAAAGTGCGA
CGGCAGAAGAAGCCCTGAAGCGAATCAGTGAACTGTACGCCATCGAGGATGAAATACGGGGATTACCAGAATCAGAGCGT
CTTGCAGCCAGGCAGCAGCGAAGCAAAGCGTTACTGACGTCGCTGCATGAATGGATGGTGGAGAAGAATGGCACGCTGTC
GAAAAAATCCAGACTGGGCGAAGCGTTCAGCTATGTACTGAATCAGTGGGACGCCCTCTGTTATTACAGTGATGACGGTC
TGGCGGAGGTGGACAATAACACAGCGGAAAGAGCGCTTCGTGCAGTCTGTCTCGGAAAGAAAAATTACGTGTTCTTCGGT
AGCGATCACGGCGGCGAGCGTGGAGCACTGCTGTACGGGCTGAGCGGCACCTGCCGTCTGAACGGTATCGATCCGGAAGC
GTATCTGCGCCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTAC
TCACCAATAAATAA

Protein sequence :
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALTRAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKL
RREVELAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGGELDYLGEVSAEQLE
LVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNW
VDACCQLMTPVNDALYRYVMNTRKLHTDDTPVKVLAPGLKKTKTGRIWTYVRDDRNAGSSSPPAVWFAYSSNRQGKHPEQ
HLRPFRGILQADAFTGYDRLFSAEREGSALTEVACWAHARRKIHDVYISSKSATAEEALKRISELYAIEDEIRGLPESER
LAARQQRSKALLTSLHEWMVEKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEVDNNTAERALRAVCLGKKNYVFFG
SDHGGERGALLYGLSGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 0.0 98
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 95
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 95
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-139 88
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 9e-134 64
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-139 64
tnp AEA34686.1 transposase Not tested Not named Protein 4e-139 64
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-139 64
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-139 64
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-138 63
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-138 63
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 8e-139 63
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-138 63
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-139 63
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-139 61
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-139 61
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-102 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-98 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_2593 YP_003235004.1 hypothetical protein VFG1736 Protein 8e-168 90
ECO111_2593 YP_003235004.1 hypothetical protein VFG0793 Protein 9e-140 64