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Name : iucD (ECO111_1296) Accession : YP_003233785.1 Strain : Escherichia coli 11128 Genome accession: NC_013364 Putative virulence/resistance : Virulence Product : siderophore biosynthesis protein Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG3486 EC number : - Position : 1339196 - 1340533 bp Length : 1338 bp Strand : + Note : Integrative element ECO111_IE02 DNA sequence : ATGAAAAAAAGTGTCGATTTTATTGGTGTCGGGACAGGGCCATTTAATCTCAGTATTGCTGCATTGTCACATCAGATCGA AGAACTGAACTGTCTCTTCTTTGACGAACATCCTCATTTTTCCTGGCATCCGGGTATGCTGGTACCGGATTGTCATATGC AGACTGTCTTTCTGAAAGATCTGGTCAGTGCAGTTGCACCTACAAATCCCTACAGCTTTGTTAACTATCTGGTGAAGCAC AAAAAGTTCTATCGCTTCCTTACAAGCAGACTACGTACAGTATCCCGTGAAGAGTTTTCTGACTATCTCCGCTGGGCTGC TGAAGATATGAATAACCTGTATTTCAGTCATACCGTTGAAAATATTGATTTCGACAAAAAAAGTCGATTGTTTCTGGTTC AGACCAGTCGGGGAGAATATTTTGCCCGCAATATCTGCCTTGGTACAGGAAAACAACCTTATTTACCACCCTGTGTGAAG CATGTGACACAATCCTGTTTCCATGCCTGTGAAATGAATCTTCGTCGGCCGGACCTGAGTGGAAAACGGATAACTGTGGT TGGTGGAGGACAGAGTGGTGCAGACCTGTTCCTTAATGCATTACGCGGGGAATGGGGAGAAGCGGCGGAAATAAACTGGG TCTCACGGCGTAATAATTTTAACGCACTGGATGAGGCTGCTTTTGCTGATGAGTATTTTACACCTGAATATATTTCAGGC TTCTCCGGACTGAAGGAAGATATTCGCCATCAGTTACTGGATGAGCAGAAAATGACATCGGATGGCATCACTGCCGATTC TTTACTGACCATTTATCGTGAGTTGTACCACCGTTTTGAAGTTCTGAGAAAACCAAGAAATATCCGTCTGCTACCCAGCC GCTCGGTAACAACTCTGGAAAGTAGTGGTCCGGGCTGGAAGTTATTGATGGAACATCATCTGGATCGGGGCAGAGAGAGC CTGGAAAGTGATGTGGTGATTTTCGCCACAGGTTACCGTTCTGCATTGCCACAAATACTTCCCTCACTGATGCCCTTGAT CACCATGCACGATAAGAACACCTTTAAAGTGCGTGATGACTTCACTCTGGAATGGAGTGGCCCGAAAGAAAATAACATCT TTGCGGTCAACGCCAGCATGCAAACTCATGGCATCGCCGAACCCCAGCTCAGCCTGATGGCCTGGAGATCTGCACGTATT CTTAATCGCGTACTGGGGCGTGATTTATTCGATCTCAGTATGCCGCCCGCACTGATTCAGTGGCGCAGCGGCAGCCGGAA AAAACCGCAGCCGGAGGCTGCTGCTTTAACTCACTATACAACAAATATTCAGGAATAA Protein sequence : MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHPGMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKH KKFYRFLTSRLRTVSREEFSDYLRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFARNICLGTGKQPYLPPCVK HVTQSCFHACEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRNNFNALDEAAFADEYFTPEYISG FSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELYHRFEVLRKPRNIRLLPSRSVTTLESSGPGWKLLMEHHLDRGRES LESDVVIFATGYRSALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSLMAWRSARI LNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAAALTHYTTNIQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iucD | AAD44749.1 | IucD | Virulence | SHI-2 | Protein | 0.0 | 99 |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 0.0 | 99 |
| iucD | NP_709457.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 0.0 | 99 |
| iucD | YP_002414043.1 | L-lysine 6-monooxygenase | Virulence | Not named | Protein | 0.0 | 99 |
| iucD | AAK71634.1 | IucD | Virulence | SHI-3 | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iucD | YP_003233785.1 | siderophore biosynthesis protein | VFG0937 | Protein | 0.0 | 99 |
| iucD | YP_003233785.1 | siderophore biosynthesis protein | VFG0618 | Protein | 0.0 | 99 |
| iucD | YP_003233785.1 | siderophore biosynthesis protein | VFG1084 | Protein | 0.0 | 98 |
