Gene Information

Name : ECO111_1242 (ECO111_1242)
Accession : YP_003233735.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1293201 - 1293626 bp
Length : 426 bp
Strand : +
Note : Integrative element ECO111_IE02; predicted protein Orf1 in insertion sequence IS682

DNA sequence : 
ATGGAACAGAAAATATTATCCTCAGAACCCCGCAGATCATTTTCAAATGAGTTTAAACTTCAAATGGTTAAACTGGCTTC
ACAACCAGGAGCCTCTGTTGCCCGTATTGCCCGGGAACACGATATCAATGATAACCTCCTGTTCAAATGGCTCAGGCTCT
GGCAGAACGAAAGGCGTATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGGCGCTGGCGTTGAATTATTACCTGTTGAG
ATAACGCCTGATGAGCAGAAAGAGCCTATGGCGGCTCTTACTCCGCTTTTATCCACTCCTTCACAAAGCACAGTCAGTGC
CAGTTCCTGTAAAGTTGAGTTCCGCCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCC
GTGAACTGACCGGGAGGGGACGATGA

Protein sequence : 
MEQKILSSEPRRSFSNEFKLQMVKLASQPGASVARIAREHDINDNLLFKWLRLWQNERRISRRLPVTTSSGAGVELLPVE
ITPDEQKEPMAALTPLLSTPSQSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 7e-56 99
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 7e-56 99
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 2e-49 90
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 7e-47 86
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 4e-46 85
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 2e-44 80
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 6e-37 79
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 7e-28 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_1242 YP_003233735.1 hypothetical protein VFG1666 Protein 6e-50 90
ECO111_1242 YP_003233735.1 hypothetical protein VFG1672 Protein 2e-37 79
ECO111_1242 YP_003233735.1 hypothetical protein VFG1738 Protein 2e-28 57