Gene Information

Name : ECO111_1217 (ECO111_1217)
Accession : YP_003233715.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1275737 - 1277275 bp
Length : 1539 bp
Strand : -
Note : Integrative element ECO111_IE02; predicted protein Orf3 in insertion sequence ISEc8

DNA sequence :
ATGAACGACATCTCTTCTGACGACATCTTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG
ACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACC
CCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA
CCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCT
GACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGGCGTT
CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGACT
GACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGTG
GGCGTATGTTCGTGATGACCGCAATGCAGGGTCAGCGTTGGCACCTGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GCATCCATCCGCAGACTCATCTTGCCTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTAT
CGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTC
AGCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGC
AGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGTTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACC
CTGTCGCGACACTCAGAGTTGGCGAAGGCGTTCGCGTACGCACTTAACCAGTGGCCGGCACTGACGTACTATGCGAACGA
TGGCTGGGTGGAAATCGACAACAACATCGCTGAAAATGCCCTGCGGGCGGTCAGTCTGGGTCGTAAAAACTTCCTGTTCT
TCGGCTCTGATCATTGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACGTGGATCCA
GAAAGCTACCTTCGCCATGTGCTTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGTGGCGCAT
AGCACTGCCAGCTGAATAA

Protein sequence :
MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL
TGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMT
DGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELY
RNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT
LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNFLFFGSDHCGERGALLYSLIGTCKLNDVDP
ESYLRHVLGVIADWPVNRVSELLPWRIALPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 99
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 99
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 99
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 99
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 99
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 99
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 99
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 99
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 0.0 99
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 99
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 99
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 98
unnamed AAL08460.1 unknown Not tested SRL Protein 0.0 96
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-163 92
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-150 64
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-154 64
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-154 64
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 3e-106 62
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 4e-140 60
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-101 59
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-117 56
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-117 56
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-128 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_1217 YP_003233715.1 hypothetical protein VFG0793 Protein 0.0 99
ECO111_1217 YP_003233715.1 hypothetical protein VFG1051 Protein 0.0 96
ECO111_1217 YP_003233715.1 hypothetical protein VFG1700 Protein 6e-164 92
ECO111_1217 YP_003233715.1 hypothetical protein VFG1736 Protein 5e-124 63
ECO111_1217 YP_003233715.1 hypothetical protein VFG1513 Protein 2e-106 62