Gene Information

Name : ybgP (ECO26_0778)
Accession : YP_003227843.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 832131 - 832862 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :
ATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCACGCTGCACTACAACCCGATCGCAC
TCGTATTGTGTTTAACGCTAATGATAAAGCTACCAGTCTGCGGGTGGATAATCGTAGCGATAAACTCCCCTACCTCGCTT
ATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGATGATCTTCTGGTCGCCCTGCCGCCGATACAACGTCTGGAACCG
AAAGCAACAACGCAGGTACGGATAGTAAAGCAAGCCTCGACCACAAAATTACCGGGCGATCGCGAAACGCTATTTTTCTA
CAATATGCGTGAAATTCCTCCCGCCCCGGAAAAAAACAGCGACCATGCCGTTCTGCAAGTCGCCATTCAGAGTCGTATCA
AGGTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTCAGCCAGCAGGGC
AACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTACCTGGGACGAAATGAAAAAGGCGTTCTCCC
CGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACGGTCAACACAAACATCGGAAATTATAGCGGCAGCCAGTTTTATC
TCGGTTATATGGATGATTACGGCGCGTTACGCATGACGACGCTCAACTACAGCGGACAATGCCATTTACAAGCCGTGGAG
GCGAAGAAATGA

Protein sequence :
MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP
KATTQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG
NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNIGNYSGSQFYLGYMDDYGALRMTTLNYSGQCHLQAVE
AKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-36 42
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 3e-36 42
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 3e-36 42
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 4e-36 42
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 4e-36 42
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 4e-36 42
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgP YP_003227843.1 chaperone VFG1547 Protein 1e-36 42
ybgP YP_003227843.1 chaperone VFG0896 Protein 2e-36 42
ybgP YP_003227843.1 chaperone VFG0885 Protein 5e-32 41